| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0008 |
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| Symbol | greA |
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| ID | 5537465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 6922 |
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| End bp | 7395 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640892173 |
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| Product | transcription elongation factor GreA |
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| Protein accession | YP_001430165 |
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| Protein GI | 156740036 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000636821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000229317 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCGACA AACCAGCATA CCTCACTCGT GATGGGCGCG CCAGGCTCGA AGCCGAGTTG
GAAGAGCTTG TCACCAAGGG CCGCAAAGAG ATCGCAGAGC GCATCAACGC TGCAAAGGAA
TTGGGTGACA TCTCAGAAAG CGGCGAATAT GAGGATGCCA AAAATCAGCA GGCTCATCTC
GAAGGTCGCA TCCGCGAGAT CAAGAGCATT CTCGCCCGCG CTCAAATCAT CGATGAAGAG
AACGGCAGCA ACCACGAAGT TCGCATCGGC TCGCGCGTGA CCGTGCGCAT CGACGGTGAG
CACGAAGAAG AAACCTGGAC AATCGTCGGC AGCACGGAGG CAAAACCGAG CGAAGGCAAA
ATATCGAATG AGTCGCCCAT CGGCGCAGCG CTGCTCGGCA AACGACCAAG CCAGCAGGTT
ACGGTGGAGA CGCCCTCCGG CACTATGAAA CTCACCATCC TCAACATTCA GTAA
|
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| Protein sequence | MSDKPAYLTR DGRARLEAEL EELVTKGRKE IAERINAAKE LGDISESGEY EDAKNQQAHL
EGRIREIKSI LARAQIIDEE NGSNHEVRIG SRVTVRIDGE HEEETWTIVG STEAKPSEGK
ISNESPIGAA LLGKRPSQQV TVETPSGTMK LTILNIQ
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