| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0004 |
|---|
| Symbol | |
|---|
| ID | 5537461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3540 |
|---|
| End bp | 3965 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640892169 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430161 |
|---|
| Protein GI | 156740032 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00189642 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000299771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACG ACGTTCACGC ACTTGCCGCC GAGCAGGGTC TCAACCTCGA GGCGCTGCAC
GCTGCACTCG CCGCTCTGCG CATGCACGCA GGAGGTGATA TTTTCTATGT GTTCTGGTTG
CCCCGCGGGC GCGTTGGATC GGACAATGGA AAGAAACGTT CCCGCACCCT GCTCGCGTTT
CCGTCTCCCG ATGCCGCGCT GGGTTTCGCC CAACGCAATC GTCTGGTCCA CCCTCCAGAC
GTTCCACGGC TTCGTCTCCT CTCCCTCGCG CAGTTGCTCC GCGCCATACT ACGCGAACCT
TCGATTGTGG CGCTGCACCT GGTGTTCGAC ACTGAGGACC TTCAATCGTA TCCGCCGGGG
CATCTCCCGC CCGGATTGCA CCTGACTCGC GCTGATGTGG TGCGTCTGAT TGGGGCGCAA
CCGTGA
|
|---|
| Protein sequence | MDDDVHALAA EQGLNLEALH AALAALRMHA GGDIFYVFWL PRGRVGSDNG KKRSRTLLAF
PSPDAALGFA QRNRLVHPPD VPRLRLLSLA QLLRAILREP SIVALHLVFD TEDLQSYPPG
HLPPGLHLTR ADVVRLIGAQ P
|
|---|
| |