| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0002 |
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| Symbol | |
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| ID | 5537459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1923 |
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| End bp | 3086 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892167 |
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| Product | secreted hydrolase-like protein |
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| Protein accession | YP_001430159 |
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| Protein GI | 156740030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5621] Predicted secreted hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000706868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000576659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATCCACA GTCATACACG CTGCTGTCGG GCATTCAGGC AGCGCCTGAT CGTGATGGTC
GCGGCAGTGG CGCTGCTGGT TGCATGTGGC GATCCCGCTG CGACTGTTGA GCCACGCGCC
CGGCTTGCCG TCGCCGAGGC AATGGCCGGC GGCGCCACCG CCGGTTTTGC CCGCGCAATT
GAGCCGCGCC CTTTCGTTTT CCCACGCGAC CACGGTCCCC ACCCTGAGTA TGCCATTGAG
TGGTGGTACT ACACCGGAAA TCTCCAGTCC GTCGAAGGCA GGCGCTTTGG CTTCCAGTTG
ACTATTTTCC GCACCGGACT GATGCCTGGC GACCCGGAGC GCCCTTCAGC ATGGGCATCG
AACAGCGTCT ATATGGCACA CTTCGCACTC AGCGACATCA CCGGCGGAAC CTTCCATGCC
TTCGAGCGCT TCAGTCGCGG CGCTGCCGGG CTTGCCGGGG CGCAGAGCGA GCCATTCCGC
GTCTGGCTGG AAGATTGGGT TGCCGAAGGA CAGGGACCCG ATGGCATGCC TATGCGTTTG
TACGCCGCCG AAGGGGATGT GGCCATCGAT CTGACGCTGG CGGCAGGCAA ACCGCCGGTG
TTTCAGGGAG ACCGCGGGTT GAGCCAGAAG AGCGCCGATG GAGGGAATGC GTCGTACTAC
TACTCCTTTA CCCGTATGCC GGTCAGTGGC GCTGTGCGCA TCGGGGGCAT GACGCATCAG
GTGCGCGGAT TGGGCTGGAT GGACCGGGAG TGGAGCACAA GCGCGCTTGG CGAAAATCAG
GTCGGCTGGG ACTGGTTCGC ACTCCACCTG GACGATGGAC GTGATCTCAT GTTTTATCGG
TTGCGCCTGC GTGATGGAAG CATTGATCCC TACAGCAAAG GGGTTCTTGT GAGCGCAGAC
GGAGCGGCGC GACGCCTGAG CGTCGATGAT GTGGCGCTCG AGCCGCTCGA TGAGTGGACG
AGTCCGCGGA GCGGCGCGAC CTACCCGGCA CGCTGGCGAC TGCGTGTGCC TGCGGAAGCG
ATTGACCTCA CTCTGACGCC GCTGCTGGCA GATCAGGAGT TGCCGGCGAC AGTTGTGTAC
TGGGAAGGGG CCGTTTCCAT CAGCGGCAGT GCAAGTGGCA GCGGGTATGT CGAAATGACC
GGTTATACCC CGGCAGACAG ATAA
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| Protein sequence | MIHSHTRCCR AFRQRLIVMV AAVALLVACG DPAATVEPRA RLAVAEAMAG GATAGFARAI
EPRPFVFPRD HGPHPEYAIE WWYYTGNLQS VEGRRFGFQL TIFRTGLMPG DPERPSAWAS
NSVYMAHFAL SDITGGTFHA FERFSRGAAG LAGAQSEPFR VWLEDWVAEG QGPDGMPMRL
YAAEGDVAID LTLAAGKPPV FQGDRGLSQK SADGGNASYY YSFTRMPVSG AVRIGGMTHQ
VRGLGWMDRE WSTSALGENQ VGWDWFALHL DDGRDLMFYR LRLRDGSIDP YSKGVLVSAD
GAARRLSVDD VALEPLDEWT SPRSGATYPA RWRLRVPAEA IDLTLTPLLA DQELPATVVY
WEGAVSISGS ASGSGYVEMT GYTPADR
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