| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0001 |
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| Symbol | dnaA |
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| ID | 5541967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 370 |
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| End bp | 1812 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892166 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_001430158 |
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| Protein GI | 156740029 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000170377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000650471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGAACCTCA CCAAAGTCTG GAACACAACC CTGGGATCGC TTCAGGTCCA ACTGCCGCGC
CACGAGTACA ACACATGGGT GCGTGGCGCC AACCTGCTCG ATATCGATAA TGGTGTGGCG
ATCATTCGCG CGCCAAATGC CTTCATCAAA GAAGGTCTCG AGAGCCGCTA CCTGACCACG
CTCCGCGAGC AATTGGGATC GGTCGTCGGG TTTCCTGTCG ATGTCCGCAT TGTTCTGGCA
ACGTCTGAGT CTGAGCGGAT CGACGGTGCA TCGATCAATG GCAGGCATGC CGCTCGCGAT
ACACGCAAAA GCGACCATCA CGCGCCACTG TCAGGCGGGT ATGGCAACGG CATAAGCCAT
CCTCTTGAGC GCGCATCGGT GCATCAACTC GAACTGCATC GGGCAGTGCG ATCCAGCATG
CTCAATCCGC GATATACCTT CGACCGCTTC ATCATCGGCC CAAGCAACCG CCTGGCAAAC
GCAGCCTGCA TGGCCGTGGC GGAACATCCA GCCCAGGCGT ACAACCCGCT GTTTCTGTAT
GGCGGCGTGG GATTGGGAAA AACGCACCTG TTGCACGCTA TCGGCAATTT CGTGCTGGAT
CGCGATCCAG AGGTGAATGT GCTGTATGTC TCCTCGGAAA CCTTTACCAA TGACCTGATT
AACTCCATCC GTCGCCAGCA GACTGAGGAG TTCCGTATTC GCTATCGGAA TATCGATATT
CTGCTGATTG ATGATATTCA GTTCATTGCG GGCAAGGAGC AGACGCAGGA AGAATTTTTT
CATACCTTCA ATACCCTGCA CTCAGCCGGC AAACAGATCA TCATTTCATC GGATCGGTCG
CCCAAAGCGA TCCTGACGCT CGAAGAACGC CTGCGCTCGC GCTTCGAGTG GGGGCTGATC
GTCGATGTGC AAATGCCCGA CCTTGAGACC CGCACGGCGA TTCTGCGCGC AAAAGCGGAA
CAATCGCCGG TTCCGGTGCC ACAGCCGGTG ATTGATTTCC TGGCTCAACG CATCCAAAGC
CACATTCGTG AACTTGAAGG GTGCCTCAAT CGGGTGACGG CATACGCGCA AATGTATAAT
ATTCCGGTCA CGATTGAGGT GGCGACGGCA GCGTTGAGCG AATTGCTCGA TACGAACCGT
CGCAAGCGGG TCACTCCCGA GGCGATCCTG CGCGAGGTTG CGGCGTTCTA TAGCGTTGAT
CTGCGCTCCC TCCAGGGGCG CGGACGCAGC CGCAATATTG TCACTCCCCG TCACGTGGCA
ATGTATCTGC TCCGCGAGGA GACCGACTCC AGCCTGATGG AGATCGGGCA GTTGCTCGGT
GGTCGCGATC ATACGACGGT GATGTATGGA TGCGACAAGA TCGCTGAAGA GATCAACACC
GATGCACGGC TGCGCCAGGA AGTCGCTGCG ATTCGTGAGC GGTTGATGAA CAGCGCTGTG
TAG
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| Protein sequence | MNLTKVWNTT LGSLQVQLPR HEYNTWVRGA NLLDIDNGVA IIRAPNAFIK EGLESRYLTT
LREQLGSVVG FPVDVRIVLA TSESERIDGA SINGRHAARD TRKSDHHAPL SGGYGNGISH
PLERASVHQL ELHRAVRSSM LNPRYTFDRF IIGPSNRLAN AACMAVAEHP AQAYNPLFLY
GGVGLGKTHL LHAIGNFVLD RDPEVNVLYV SSETFTNDLI NSIRRQQTEE FRIRYRNIDI
LLIDDIQFIA GKEQTQEEFF HTFNTLHSAG KQIIISSDRS PKAILTLEER LRSRFEWGLI
VDVQMPDLET RTAILRAKAE QSPVPVPQPV IDFLAQRIQS HIRELEGCLN RVTAYAQMYN
IPVTIEVATA ALSELLDTNR RKRVTPEAIL REVAAFYSVD LRSLQGRGRS RNIVTPRHVA
MYLLREETDS SLMEIGQLLG GRDHTTVMYG CDKIAEEINT DARLRQEVAA IRERLMNSAV
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