| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_2139 |
|---|
| Symbol | |
|---|
| ID | 5457452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 2108362 |
|---|
| End bp | 2110095 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_001425443 |
|---|
| Protein GI | 154705984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.840805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCA TATCAGAATC TTACTTTGAC CAAGTTTTTA ATACGCTTGG AAAATTAGAC
GTTGCCTTAA GCGCTCTTAA TGAAGCCATC GTTTGGATAG ATCACGAGGG GCATATTGCG
TGGTGCAATC TTCCTTTCAG TCAATTAATC AGCCGACCTC GCATCGAAAT CATTGGGCTT
TTCATTGATA AGACAATTAC TCTTAAAAAA GGGAATCAAA TTATTTCTCT TTTTAAAGTT
TGTCACGAAA AACTTCATTT TAAGGAGGAA ATTATTGAGT TTGCAAAAGA TAGCAAAACT
TTATATTTAT CGGCGTTTAG TCAACAAATA GTCGATAAAA AGGGGGGCCT GCATTTTATT
ATTGCTCTAC AAGATGTCAC ACTTCAACAA TCTATCTTCC ATACGCTTCT TAAAAATGAA
GCTAGAATTG CCTATTTGGC TTCCCGCGAT CAGTTAACTT CATTGCCGAA TCGGCGAGAA
TTTATCCATC GATTAAACGA GGAAATAGGA AAACCTAAAT CCGTCGATTC TAAACTGAGT
CTTTTATTTC TAGATTTGGA CAATTTCAAA GACATCAATG ATGCCTTAGG CCACCACATG
GGCGATCGCG TCCTCGTACA TGTTTCGGAT CGATTACGAA AGCTGGACTT ATCGCCACTT
AATTATTTTT TGGGACACCT GGGTGGTGAC GAGTTTGTTA TTCTTCTAAA AGACTTGCAA
CAAGATAAAG ATGCTACCCT TTGCGCCAAG AAAATTTCGA ATGCCTTTTC CGAATCGTTT
AAAATCAAAA ATTTTTTATT GTACGTCAAT TTTAGCATCG GCATTACTAT TGATTTTTAT
TCAAAAACCG ACAGCGAAAC ACTCTTAAAA AAAGCCGATA TGGCAATGTA TCAGGCTAAA
AAGAAAGGTC GAAATACATT CTCTTTTTAT ACGGAAAAAT TGGGAGAACG CTATCGGCAT
CGTTTAATTT TGGAAAACGC TTTCCATCAA GCTTTGGAAG AAAACCAATT TTATTTGGTT
TATCAACCTC AATACGAATT ATCTACTCAG AAAATCCGCG GGATGGAAAC GCTCTTAAGG
TGGAAACATC CGGAATTGGG AGAGATATCG CCGGAAGATT TTATCCCCAT TGCGGAGAAA
GCGGGAATCA TCATTCCCAT CGGGGAGTGG GTATTACGCC ATGCGTGCCA ACAGTATAAG
CAATGGCAAT CAAAAATCCC CGTAGGAGAA ATTAAATTAT CCATTAACGT CTCCCCGCCC
CAATTAATTA GAAAAAAATT TGCGAATTCA GTTGCTCATA TTCTTAAAGA AACAAATACG
CCGCCGAATG TTATTGAACT CGAAATCACT GAAAACTCTT TGATGACTAA ACTAAATAGC
GCTAAGAAAG TATTAGAGGA GCTGCGAGAA ATAGGTCTTA ATATTGCGAT CGATGATTTT
GGCACGGGCC ACTCCTCGTT AGCCTATCTC AAGATACTGC CCATTGACAC CGTTAAAATT
GATAAGGCCT TTGTTAAAGG ACTTCCTGAT GACCAACACG ATACGGCTAT CGTAAAATTC
GTTATCGATT TAGCCCGTTC TCTTAATTTA ACAACAATCG TAGAAGGGGT CGAAAAAAAA
GAACAAATGG AATTTCTTTT AAAACTGGGT GGCCCGTTAG TACAAGGCAA TTATTTTTCA
AAAGCCATTG AAGCTGATTT AATGTTTAAA TTACTAAAAA ATCAGTCTCC ATAA
|
|---|
| Protein sequence | MKSISESYFD QVFNTLGKLD VALSALNEAI VWIDHEGHIA WCNLPFSQLI SRPRIEIIGL
FIDKTITLKK GNQIISLFKV CHEKLHFKEE IIEFAKDSKT LYLSAFSQQI VDKKGGLHFI
IALQDVTLQQ SIFHTLLKNE ARIAYLASRD QLTSLPNRRE FIHRLNEEIG KPKSVDSKLS
LLFLDLDNFK DINDALGHHM GDRVLVHVSD RLRKLDLSPL NYFLGHLGGD EFVILLKDLQ
QDKDATLCAK KISNAFSESF KIKNFLLYVN FSIGITIDFY SKTDSETLLK KADMAMYQAK
KKGRNTFSFY TEKLGERYRH RLILENAFHQ ALEENQFYLV YQPQYELSTQ KIRGMETLLR
WKHPELGEIS PEDFIPIAEK AGIIIPIGEW VLRHACQQYK QWQSKIPVGE IKLSINVSPP
QLIRKKFANS VAHILKETNT PPNVIELEIT ENSLMTKLNS AKKVLEELRE IGLNIAIDDF
GTGHSSLAYL KILPIDTVKI DKAFVKGLPD DQHDTAIVKF VIDLARSLNL TTIVEGVEKK
EQMEFLLKLG GPLVQGNYFS KAIEADLMFK LLKNQSP
|
|---|
| |