| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_2078 |
|---|
| Symbol | pdxA |
|---|
| ID | 5458024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 2053191 |
|---|
| End bp | 2054114 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_001425384 |
|---|
| Protein GI | 154705986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA TTGCAATTAC GCTCGGTGAC CCCGCAGGCA TTGGGCCTGA TATTTTAATA
AAATTGGCAC AGCATAAATT TTCTGCTCCA CTCTGCGTTA TTGCTGATCG GGATTTATTA
GCGAATCGCG CTAACCGGTT AAGCCTTACG CTTCCATCAA GCTTAGTCAT ACAGCATGTG
CCTTTAAAAA AACCCTGCCT CATCGGAAAA CCCGATCCCG CCAACGCTGA ATATGTATTA
GAAACTTTGC GCATCGCTGC AACGGGTTGT CAGCGTAATG ATTATAAAGC AATGGTCACG
GGGCCGGTGA GCAAAGCGGT TATCAACGAA GCAGGTATCG CTTTTACCGG CCATACCGAG
TGGCTTGCCA AGCTCGCTGG CGTTCAACGA ACCGTCATGC TTTTTGTAAC AAATGAATTG
AAAGTCGCTT TATATACCAC TCATATACCC TTGGCTGATG TCCCTTCTTC ATTAGCCCCT
TCGACGCTAA AAGAATCCCT TCAAATTTTG CAAAAAGGAT TACAAAAATA TTTTTCCATC
CCGAATCCCC GCATTATAAT TTGTGGCTTA AACCCTCATG CCGGTGAAAA TGGTTACTTG
GGGAAAGAAG AAATTAACGT CATTGAGCCC GTCATTAAGG CACTAAACAC CGAAGGTTTT
TTATTAACCG GCCCCCTTCC TGCCGACACC GCTTTTACGC CCCGTCATAG TCATCACGCT
GATGCTATTT TAGCGCTATA CCACGACCAA GGTCTGCCCG TTGTTAAGGC ACTCGGATTC
GGCCAGGCCG TCAACGTGAC TTTAGGTCTC CCTTTCCTTC GGACCTCTGT CGATCACGGC
ACTGCTTTTG ACCTCGCCGG CACCGACCGT GCCGATGAAA GTAGTCTATT AGCCGCTGTT
AATCTAGCGG CTGCTCTTTC ATAA
|
|---|
| Protein sequence | MKSIAITLGD PAGIGPDILI KLAQHKFSAP LCVIADRDLL ANRANRLSLT LPSSLVIQHV
PLKKPCLIGK PDPANAEYVL ETLRIAATGC QRNDYKAMVT GPVSKAVINE AGIAFTGHTE
WLAKLAGVQR TVMLFVTNEL KVALYTTHIP LADVPSSLAP STLKESLQIL QKGLQKYFSI
PNPRIIICGL NPHAGENGYL GKEEINVIEP VIKALNTEGF LLTGPLPADT AFTPRHSHHA
DAILALYHDQ GLPVVKALGF GQAVNVTLGL PFLRTSVDHG TAFDLAGTDR ADESSLLAAV
NLAAALS
|
|---|
| |