Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_2069 |
Symbol | dapF |
ID | 5457413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 2045502 |
End bp | 2046332 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | diaminopimelate epimerase |
Protein accession | YP_001425375 |
Protein GI | 154706485 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000531715 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA ATTTTACTAA GATGCAGGGA TCGGGTAATG ATTTTGTGGT CATTGATGCC ACAAAAACCC CTTTTCAATT AACGACATCG CAAATCCAGA AAATGGCGAA TCGGCGGTTT GGCGTGGGTT TTGATCAATT ATTGGTGATC GAGCCGCCCA AAAATAATTC AGTGGATTTT CATTTTCGGA TCTTTAATGC CGATGGGAGT GAGGTAGGGC AATGTGGGAA TGGCGCTCGT TGCATTGCGC GTTTCATCCG TGCTCATCAA TTAAGCGATC GAGAAGAGCT GCGCGTTTCT ACCCTCAATG AGGTATTAGA ATTGAAAATT CAACCCGATG GTAAAGTATC CGTGAAAATG GGCGTTCCGC GCTTTGAGCC TACAGAAATT CCTTTTATCG CCTCTGGTGT AGCCAATTTC TATGACATTG CCGTGGATAA TCAAATAGTA AAGCTGGGTG TAGTCAATAT CGGAAATCCC CATGCGATAA TTCCGGTGGA GCGCATCAAT GCCGAAGAGG TAGGTAAGCT TGGAGCCCGT TTAAGTGTGC ATGAGTGTTT TCCGGAAGGC GCCAACGTCG GTTTTATGCA AGTCATCGAT CCTCAAAATA TTCGACTGCG CGTTTACGAA CGGGGGACGG GTGAAACTTT GGCTTGCGGC AGTAACGCTT GCGCCGCCGT AGCGGTAGGC CGTCGTTGTG GACTGCTCCA AGAGCGCGTG GTCGTTAGTC AGCCTGGGGG GAGCCTCACC ATCGATTGGC AAGGACCGCT AACTCCGGTC ACAATGACAG GACCTGCAAC CACCGTTTTT TGTGGTGAGT GGCTCGATTA G
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Protein sequence | MKVNFTKMQG SGNDFVVIDA TKTPFQLTTS QIQKMANRRF GVGFDQLLVI EPPKNNSVDF HFRIFNADGS EVGQCGNGAR CIARFIRAHQ LSDREELRVS TLNEVLELKI QPDGKVSVKM GVPRFEPTEI PFIASGVANF YDIAVDNQIV KLGVVNIGNP HAIIPVERIN AEEVGKLGAR LSVHECFPEG ANVGFMQVID PQNIRLRVYE RGTGETLACG SNACAAVAVG RRCGLLQERV VVSQPGGSLT IDWQGPLTPV TMTGPATTVF CGEWLD
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