Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_2047 |
Symbol | |
ID | 5458341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 2022255 |
End bp | 2024105 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | type I secretion outer membrane protein |
Protein accession | YP_001425353 |
Protein GI | 154706439 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA AATTCCTCGT TTTTGTTCTT ATCCTCTTTT CATTAGTAGC CGCCCCCTTG CTTTATGCTG AAGATTTGGT TCAAGTTTAT TGTCAAGCCC TCGCGAGTGA CCCCACTTTT CAAAAAGCAC ACGCGGACTG GTTGTCCGCA AGGCAAAACC TTCCTATCGC TATGTCAGGT ACCGGAACGC CGGGATCGGG TTTGTTTCCT TATGTGGATA TAACTGCGGG ACTCGATCGC ACCTTTCAAC GAATTGAAGC GGGATCATCC AGCGTGAGCG GTTACTTTAA CCAACACAAT TACCAAGTCA CCGTCACTCA ACCGATTTTC AATTATGCGA CCTGGAAGGC CATTAGTAGT GCTAGTTTTT CGGTAAAAGC GGCCACGGCG ACTTATATTG AAGCTGCCCA GGATTTGATA TTTCGAACTG CCAAGGCCTA CTTTGATGTT TTAGATGCTT ACGATCAGTT GCAATTTACT TTGGCGCAGA AGGAATCATT TTATCACCAA TTGGTGACGG CACAGGAAAA ATTTAAAGTC GGATTAATTG CGATCACCGG CGTTTATGAT GCCCAAGCGA GCTACGACCA AGCGATAGCA CAGGAAATTC AAGATCGAAA TAATTTAGAC AACCAGCTTG AAAACCTACG GGCGATTACG GGTCAGGAAT ACCGCTCGTT GGCTAGCCTG AAAAAATCCA TTCCGCTAGT GATACCCCAT CCTCGAAACA TCGATGCCTG GACGGCGGTT GCAGAGCGAC AAAGTTTCGC TATTCAGTCC GCATTATATA CCATGCTGGC TCAGCGCGAG ACGGTTAAAG AAACGGCGGC CCAACGCTAT CCCACGCTAA CAGGGACTTT TTCCTATGGC GCTCAACAAC GAGGGTTTCC CCCCAGCCTC TCCGGCCCGC CTACGACGGG GGAATTTTTA GATACGACTA CCACAACAGC CACGGCTGGT CTTAATTTGA ATTTCCCCGT TTTCCAAGGC GGTTTTGTGA CCCATTCTAC CCGGCAGGAA GAATATAATT ATTTGTCGGC CAGCGACCAA CTTAATTTCA CTCATCGCGA TGTGGTACGA CAAACGCGTC AAGCTTATTT AGGGGTTGAT TCGGGAATTA GTAAAATCAG AGCGGACCGT CAAGCCATCA TTTCTGCGCA AAACAAACTG GAAGCGACAC AGGCGGGGTA CGTAGTGGGA ACCCGAACCA TGGTAGACGT ATTGGATGCG GTGACCTCTT TGTACCAAGC TCAGCAACAA TGGGCAACGG ATCGATACAG TTACATCATC AACATCATTA CTTTAAAACA ACAAGCGGGA ACATTATGCC CCCATGATTT AGCGCAAATA AATACCTGGC TAGGAAAAGC GGTACGCTTT GATGTTGAAA AGCCGGTGAA TGCGAAAGTA TTCACACCTT CAACAACCCT CCCACACACA GTTAAGCACG TCCATTCTCC CAAAGGAGTG CAGCGCGCAA CTCGGTCCCA TCGACCTCTA ATTAAAGCAT CACGCCATCA CACTTCCCCC GTCCACAGCG CGTCTCACAT CGAAACCGTA CACGCCCATT ATGCAATTCA ATTATTTGCC TCGCGTACGC TAGCTGAAGC TACTGCATTC AAAAACAAAC ACCGTTTGCA TGATCTTCGT ATTATTCACC AAAATGGCTG GTACAAAGTT TTATCGGGTC ATTATTCCAC TCGCCAGGCA GCCACCATCG CTTTGCATCG CTTACCTTCT TCCCTCCAGA AATTAAAGCC GTGGGTTGTC AGGGTGCCGA AAGTCCAGTC AACGTCGATC AAACCACTAT CTTTGCAAAA AAAGGCCACG CACCTGCCCC CACCGAGATA A
|
Protein sequence | MKKKFLVFVL ILFSLVAAPL LYAEDLVQVY CQALASDPTF QKAHADWLSA RQNLPIAMSG TGTPGSGLFP YVDITAGLDR TFQRIEAGSS SVSGYFNQHN YQVTVTQPIF NYATWKAISS ASFSVKAATA TYIEAAQDLI FRTAKAYFDV LDAYDQLQFT LAQKESFYHQ LVTAQEKFKV GLIAITGVYD AQASYDQAIA QEIQDRNNLD NQLENLRAIT GQEYRSLASL KKSIPLVIPH PRNIDAWTAV AERQSFAIQS ALYTMLAQRE TVKETAAQRY PTLTGTFSYG AQQRGFPPSL SGPPTTGEFL DTTTTTATAG LNLNFPVFQG GFVTHSTRQE EYNYLSASDQ LNFTHRDVVR QTRQAYLGVD SGISKIRADR QAIISAQNKL EATQAGYVVG TRTMVDVLDA VTSLYQAQQQ WATDRYSYII NIITLKQQAG TLCPHDLAQI NTWLGKAVRF DVEKPVNAKV FTPSTTLPHT VKHVHSPKGV QRATRSHRPL IKASRHHTSP VHSASHIETV HAHYAIQLFA SRTLAEATAF KNKHRLHDLR IIHQNGWYKV LSGHYSTRQA ATIALHRLPS SLQKLKPWVV RVPKVQSTSI KPLSLQKKAT HLPPPR
|
| |