| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_1951 |
|---|
| Symbol | pilB |
|---|
| ID | 5457298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 1932415 |
|---|
| End bp | 1933968 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | type 4 pili biogenesis protein (nuleotide-binding protein) |
|---|
| Protein accession | YP_001425261 |
|---|
| Protein GI | 154706005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTA AGGTCGAGGG CCTCGCTCAT ATTTTATTGC AGACAAATGC GTTAACTAAC
AGCCAAATTG CCCGTGCTAT TGAACAGGCG GCGGGAGCAC AATCACCGTT GCTGCATTAT
TTAGTTACCG AGAAAATAGT ATCCTCAGAA AAAATAGCAG AAGCCTGCGC CACTTACTTT
GGTTTAGAAG CGATTAACTT GCAGACTCAA CCACTGAACC CATCGCTTTG TCATGAAATA
CCACGGAAAT ATTTAATGCG CTATGCGTTC ATTCCACTTG CAGTAAAATC ACCTACGCTA
GCTATTAGCG ATCCGCTATA TTTTCCCTTA ATCGAAGAGC TCCAGTTTCA GACTAATAAA
CAATACAAAA TTGTTTTTGC TCCCTATAAA TCATTTGCTG CGTTAATAAA TAATTTTGTG
AGTCGTCAAA TTTACGAGAC AGTTTCACAA GGTAAAGCTT CCATTGTTGA GTTAGTAAAT
CAAGTGCTCA CGGATGCCAT CTATCGAGAA GCGTCAGATG TTCACTTTGA ACCGATGCAA
CAACATTACC GAATTCGGAT GCGTATCGAT GGGATTTTAC ATACTACTAC TCTCTTGCCA
AATACACAGT CGCCAGCAAT GAGTAGCCGG TTAAAAGTAC TGGCTGAATT AGATATTTCT
GAAAAACGCT TGCCGCAGGA TGGGCGCTTT TATTTTACAA CGCTTACCCA TCTTAAACGT
GACTGCCGAC TTAGTAGCTG CCCGACTTTA TTCGGGGAAA AAATCGTCAT CCGTTTACTA
AACCCCGTTC ATCATTTATT AAAATTTGAA GAGTTGGGTT TAGAAGAAAA ACCGAAGCAA
CTCATCATGA AAAAAATCAA ACAACCCCAA GGTTTGATTC TTGTCACAGG ACCCACGAGA
AGCGGGAAAA CGGTTTCACT GTATGCCGCG CTTAATCAGA TTAATTCAAC TCAAAAAAAT
ATCTCCACCG TAGAAGATCC CATTGAAATA CAATTAGCCG GGGTTACCCA AGTTAATATT
CGCCCAAAAG CCGGACTTAA TTTCGCCGCT GTATTACGCG CTTTTTTGCG CCAAGATCCT
GATGTTATCA TGGTGGGGGA AATTCGCGAT TTTGAAACTG CTTCCATTGC TGTTCGCGCT
GCACATACCG GGCATTTAGT CTTATCCACC TTACATACCA ATAGCGCCGT CGAATGCATT
ACACGATTAA TCGATATGGG GATCGAGCCA TTCAACCTTG CTAGCGTATT AAAGCTCGTG
GTTGCTCAGC GACTCGTCAG ACAGCTTTGC GCTCATTGCC AAGCAACGAA GATTTCCTGC
CCCTTTTGTT TAAACGGATA CCAGGGGCGT ACGGGAATCT ATGAAGTTCT GCCTATTACT
CCTTCCATTA TCGAACTTAT TTTACAAAAA CGATCCGCGC AAGAAATTAA TGCCTGCGCC
ATACAAGAGG GCATGCAAAC TTTGTGGCAA GCAGCTTTGA ATAAAGCAAA GACGGGTATT
ACAAACCTCA ACGAAATTTA CCGCGTGATT CAATCTGAAA ATAACTATGC TTAA
|
|---|
| Protein sequence | MQTKVEGLAH ILLQTNALTN SQIARAIEQA AGAQSPLLHY LVTEKIVSSE KIAEACATYF
GLEAINLQTQ PLNPSLCHEI PRKYLMRYAF IPLAVKSPTL AISDPLYFPL IEELQFQTNK
QYKIVFAPYK SFAALINNFV SRQIYETVSQ GKASIVELVN QVLTDAIYRE ASDVHFEPMQ
QHYRIRMRID GILHTTTLLP NTQSPAMSSR LKVLAELDIS EKRLPQDGRF YFTTLTHLKR
DCRLSSCPTL FGEKIVIRLL NPVHHLLKFE ELGLEEKPKQ LIMKKIKQPQ GLILVTGPTR
SGKTVSLYAA LNQINSTQKN ISTVEDPIEI QLAGVTQVNI RPKAGLNFAA VLRAFLRQDP
DVIMVGEIRD FETASIAVRA AHTGHLVLST LHTNSAVECI TRLIDMGIEP FNLASVLKLV
VAQRLVRQLC AHCQATKISC PFCLNGYQGR TGIYEVLPIT PSIIELILQK RSAQEINACA
IQEGMQTLWQ AALNKAKTGI TNLNEIYRVI QSENNYA
|
|---|
| |