Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1920 |
Symbol | |
ID | 5459216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 1896594 |
End bp | 1897952 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | peptidoglycan-specific endopeptidase, M23 family |
Protein accession | YP_001425234 |
Protein GI | 209364208 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0283385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAGTATT TTATTCCGTG CTTTTATATT ACGTGGTATG ATTCAGAATT GGAACTGGCA ACCCCGGACA AAACAAAGGG AACCTCAATG AAAGGTTGGA AATCAACAAT CGTAATTTTT ACTGTCATCC CCCTACTTTT CGTCGCACTC GCAAGTTTAC TTTACGCTCA TGCCTCCCCG AACACGAAAC AACTAACGCT CAATGAACCT CATTCAATCA CTATTGTAAA AAATATAGAC AACTCTAATT CGGATTGGAA AAAAATAATT ATTAAAAAGG GGGATACTTT AGCGGCTATT TTTAATCGTC TAAAGATTAA CCAAAAAGAT TTAGTTCAAC TGGCAAAACA ATATAAATCG TTGACCGCTC TTCATCCCAA TCAAACACTC TATTTTCAAA TCAAACCGCC CCACCAATTG GCCGCGCTCA AATATCCCCT CTCATCCGCC AAGACTTTGA TCATTAAACG CGAGAACAAT CGCTTCATCA GCCAAATAGA CCAAAAACCG ATTACCACCG CATTGGGTTA CAAATCCGTA ACCATACATC ATTCTCTGAA TCAAGATGCC AGAAACGCCG GTTTGACCTA TCGGATGCAA AAAGAACTTC AATCGATTTT TGGCGGGCAG ATTAATTTTT CACGCGATAT TCACCGCGGG GATCGTTTTG AATTTTTGTA TCAAGTTGAA TACGTCAACG GGAAAAAGTA TCGCGACGGC GATATCATCG CCGCGGAATT CAGCCATCGG GGCAAAACCT ATCAAGCTGT TCGCTACACT TATCCGATCG CGCATACGGC CTATTACACG CCGGACGGTC GTGGGATTGA AGCGCGTTTC TTACATGCGC CATTGCATTA CACTCGCATC AGCAGTCGTT TTACCTATCA TCGTTTAGAC CCTATTTTAC ATAAAATACG CCCTCACTTG GGAGTCGATT TTGCCGCACG TTTCGGAACG CCCGTTAAGT CCATCGGCGA AGGGCGTGTC GTTTTTATCG GACGAGATGG CGGCTATGGA AGGACCGTTA AAATTAGTTA TGGGCATCAT TATCTGGCGC TGTATGGGCA TCTGTCGCGT TTTGCGAAAA TTAAACGCCA CCAGTGGGTG CACAAAGGGC AAATCATCGG ATACGTGGGT GAATCCGGCT GGGCAACCGG TCCTCACCTT CATTTTGGAT TTTTCATCGA TGGTAAAGCC AAAGATTGGT TAGCCATGAA ACTGCCTACC GACCAATCCA TTCCCCGCAG TTATGAAACC CGTTTTCACA AAGAAGCTAG ACAGTTGTTA GCTCAATTGC ATCTCCATCA AGACACTGAA TTAGCGGCGA ATAACATGAA AATGAAACAT CCGAGTTAA
|
Protein sequence | MEYFIPCFYI TWYDSELELA TPDKTKGTSM KGWKSTIVIF TVIPLLFVAL ASLLYAHASP NTKQLTLNEP HSITIVKNID NSNSDWKKII IKKGDTLAAI FNRLKINQKD LVQLAKQYKS LTALHPNQTL YFQIKPPHQL AALKYPLSSA KTLIIKRENN RFISQIDQKP ITTALGYKSV TIHHSLNQDA RNAGLTYRMQ KELQSIFGGQ INFSRDIHRG DRFEFLYQVE YVNGKKYRDG DIIAAEFSHR GKTYQAVRYT YPIAHTAYYT PDGRGIEARF LHAPLHYTRI SSRFTYHRLD PILHKIRPHL GVDFAARFGT PVKSIGEGRV VFIGRDGGYG RTVKISYGHH YLALYGHLSR FAKIKRHQWV HKGQIIGYVG ESGWATGPHL HFGFFIDGKA KDWLAMKLPT DQSIPRSYET RFHKEARQLL AQLHLHQDTE LAANNMKMKH PS
|
| |