| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_1853 |
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| Symbol | rplD |
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| ID | 5458193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Coxiella burnetii Dugway 5J108-111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009727 |
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| Strand | - |
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| Start bp | 1830375 |
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| End bp | 1830995 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001425181 |
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| Protein GI | 209364189 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000203721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGGAGC TGCCCGTAAA TTCATTTGAC AAAAAAGAGG CAAGCACGCT TACCGTTGCT
GATAGCGCCT TTGGCTCCGA ATATAAAGAA GGTCTGGTGC ATCAAGTGGT GAATGCTTAT
TTAGCGGGTG GGCGCGCAGG AACGAAAGCC CAAAAAACGC GACGAGAAGT GAGTGGTAGT
GGAGCAAAGC CTTGGCGCCA AAAAGGGACG GGGCGTGCAC GAGCTGGAAG TAGCCGCAGT
CCATTATGGC GATCAGGAGG TGTTGCTTTT GCAGCAAAGC CGCGTGATTT CACTCAAAAA
GTAAATCGAA AGATGTATCG CAGTGCAATG GCCTCTATTT TGTCGGAATT AATTCGACGA
GAACAATTGG TAGTAGTCGA CTCACTAAAG CTAAATGAGC CAAAAACACG TGAATTAAAA
GAATCGTTGA AAAAGTTAAA TTTGGGAAAT GTATTGATTA TCATCGACGG GGATGATCGC
AATATTAATT TAGCCTCGCG CAACATGGTG GGGGTTTCTG TGTGTGACGC TTTGCACGTC
GATCCTGTGA GCTTAGTTGC CGCAGAAAAC ATAGTGGTTA CTGTTGATGC CGTAAAGAGA
CTGGAAGAGA GATTATCATG A
|
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| Protein sequence | MMELPVNSFD KKEASTLTVA DSAFGSEYKE GLVHQVVNAY LAGGRAGTKA QKTRREVSGS
GAKPWRQKGT GRARAGSSRS PLWRSGGVAF AAKPRDFTQK VNRKMYRSAM ASILSELIRR
EQLVVVDSLK LNEPKTRELK ESLKKLNLGN VLIIIDGDDR NINLASRNMV GVSVCDALHV
DPVSLVAAEN IVVTVDAVKR LEERLS
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