Gene CBUD_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCBUD_1848 
SymbolrpsC 
ID5457961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCoxiella burnetii Dugway 5J108-111 
KingdomBacteria 
Replicon accessionNC_009727 
Strand- 
Start bp1827914 
End bp1828597 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content49% 
IMG OID 
ProductSSU ribosomal protein S3P 
Protein accessionYP_001425176 
Protein GI154706269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00165537 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAA AGGTCAATCC AGTAGGCATG CGCATTGGTA TCACTAGAGA TTGGACATCC 
AATTGGTACG CCGATAAAAA AGATTTTGCT GATCGTTTAA ACGAAGATCT CAATGTACGT 
CAATTGCTGC AAAAACGATT AAAAGGCGCG GCGGTAAGCC GGATTCAGAT CGAGCGACCG 
GCGCGGAATG CAAAAATTAT CATTCATTCT GCTCGTCCTG GTGTCATCAT TGGGAAAAAA 
GGCGGCGAGA TTGAAGCTTT ACGTGACGAG ATTTCCAAAG TGATGAAGGT GCCTGTGCAC 
ATCACCATCG AAGAAGTCAG AAAGCCAGAA TTAGACGCTA AATTAGTCGC TGAAAACATA 
GCTCAACAAT TAGAACGTCG GGTCATGTTC CGCCGTGCAA TGAAGCGCGC TGTACAGAAC 
ACGCTCCGTC AAGGTGCATT AGGTGTCAAG ATTAGTGTGA GTGGTCGACT GGGCGGCGCT 
GAAATTGCGC GAACCGAATG GTACCGTGAA GGACGGGTGC CTTTGCACAC GTTCCGTGCC 
GACATCGATT ACGCCACGGC GAGCGCTAAA ACGACCTACG GTATTATTGG CGTGAAGGTA 
TGGATTTTTA AAGGCGAGGT GCATGCACCA AAACCACAGG CTGAAGAAGC CGCTCCACAA 
GAGACTGAAG AAGAAGTGAA GTAG
 
Protein sequence
MGQKVNPVGM RIGITRDWTS NWYADKKDFA DRLNEDLNVR QLLQKRLKGA AVSRIQIERP 
ARNAKIIIHS ARPGVIIGKK GGEIEALRDE ISKVMKVPVH ITIEEVRKPE LDAKLVAENI 
AQQLERRVMF RRAMKRAVQN TLRQGALGVK ISVSGRLGGA EIARTEWYRE GRVPLHTFRA 
DIDYATASAK TTYGIIGVKV WIFKGEVHAP KPQAEEAAPQ ETEEEVK