| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_1834 |
|---|
| Symbol | secY |
|---|
| ID | 5457962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | - |
|---|
| Start bp | 1821531 |
|---|
| End bp | 1822859 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001425162 |
|---|
| Protein GI | 154707133 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00171083 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA CAAAATTGGG TACATCGTTG TCGCAAGGCG GTTTAAGCGA ATTAAAACGT
CGCTTATTAT TCGTCTTGAT TGGCATTATT GTGTATCGCC TGGGTGCTTA TATCCCCGTG
CCTGGCCTTG ATCCTTCTCG ATTGGCTGCT CTTTTTCATC AGCACGAAAC GGGTTTTTTG
GGAATGTTCA ATATGTTCTC AGGAGGCGCC TTAAGCCGCA TGACGATTTT TGCTTTGGGC
GTAATGCCTT ATATTTCTTC TTCCATTATC GTCCAAATGT ACAGTCAAAT TTCGCCTAAA
ATGCAAGCGC TTCGGAAAGA AGGTGAAGCA GGGCGTCGAA AAATTAATCA ATATACCCGT
TATGGGACGG TCATTTTATC CTTATTGCAA TCGGCTTTTA TGACTAAATG GTTAGTCAGC
AGTGGAACAG TAATCAATCC TAATTTGGGA TTTTACTTCA CCGCCATCGT CACCTTGGTG
ACGGGGACGA TGTTCTTAAT GTGGCTAGGC GAACAGATGA CGGAGCGGGG CGTCGGTAAT
GGTATTTCGT TGATTATTTT TGCCAGTATC GCTTCGCGAT TCCCAGCAGC TATCGGGCAA
GTATTTACCC AAGTGCGACA AGGTCAAATG TCGGTACTCA TATTGCTACT CTTAATCGCC
GTCATTGTGT TGGTGACGTT AGTAGTGGTA TTTTTTGAGC GTGCCCAACG CCGGATTACG
ATTAACTATG CCAAGCGCCA GCAAGGCAGG AAGTTATACG CCGCTCAAAG TAGTCATTTA
CCGCTGAAAA TAAATATGGC TGGGGTGATT CCCGTTATCT TTGCTCAGAG CATCATTTTG
TTCCCTGGTG CAGTGGCTAA ATTCATGTCT TCCGTTAAAG GCCTGGGCTG GTTAAATGAT
GTTTCTTTAG CGCTTTCATA CGGTCAGCCA GCTTACATTG TCGTTTTTGC CATTGCCGTG
ATATTTTTCA GCTTTTTTTA CACCGCTTTG GTGTTTAACC CCAAAGAAAC GGCGGACAAT
TTAAAAAAAT CCGGCGCTTT TATTCCCGGT ATCCGTCCCG GTGAGCAAAC AGCGAATTAT
ATTGACAAAG TGATGACGCG CCTAACTTTA GTCGGTTCTG TTTACCTTGC ATTGGTGGCA
TTGCTGCCAC AGTTTTTGAT TTTGGCCTGG AACGTTCCTT TTTATTTTGG GGGAACCTCG
TTGTTGATTG TCGTCGTGGT CATTATGGAC TTCATGGCGC AAGTGCAAGC TCATTTGATG
AGCCATCAAT ACGAGTCCTT AATGAAAAAA TCAGGCCTGA AAGGCTCGAA GTTTGGGCTT
ATTCGATAA
|
|---|
| Protein sequence | MAKTKLGTSL SQGGLSELKR RLLFVLIGII VYRLGAYIPV PGLDPSRLAA LFHQHETGFL
GMFNMFSGGA LSRMTIFALG VMPYISSSII VQMYSQISPK MQALRKEGEA GRRKINQYTR
YGTVILSLLQ SAFMTKWLVS SGTVINPNLG FYFTAIVTLV TGTMFLMWLG EQMTERGVGN
GISLIIFASI ASRFPAAIGQ VFTQVRQGQM SVLILLLLIA VIVLVTLVVV FFERAQRRIT
INYAKRQQGR KLYAAQSSHL PLKINMAGVI PVIFAQSIIL FPGAVAKFMS SVKGLGWLND
VSLALSYGQP AYIVVFAIAV IFFSFFYTAL VFNPKETADN LKKSGAFIPG IRPGEQTANY
IDKVMTRLTL VGSVYLALVA LLPQFLILAW NVPFYFGGTS LLIVVVVIMD FMAQVQAHLM
SHQYESLMKK SGLKGSKFGL IR
|
|---|
| |