Gene CBUD_1830 details

Gene Information

• Locus tag: CBUD_1830
• Symbol: rpsD
• ID: 5457672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: -
• Start bp: 1819765
• End bp: 1820385
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 43%
• Product: 30S ribosomal protein S4
• Protein accession: YP_001425158
• Protein GI: 154706831

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00631907
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAGGT ATTTAGGTCC AAAATGTCGA TTATCACGTC GCGAAAAAAC TGATCTGCAA 
TTGAAAAGCG GCATTCGTGC AATCGATTCA AAATGTAACA TCGAACGTAT CCCGGGTATG 
CATTGGCAGC GCCGCGGTCG GACTACCGAT TATGGGGTTC AACTGCGAAT GAAACAAATG 
ATAAAGCGCT ATTATGATGT ATTAGAAAAG CAATTCGCTA ACTATTACAA ACAAGCTGAT 
CGCTTAAAAG GCTCAACGGG CGATAACTTG TTAAAGCTTT TAGAAAGTCG GCTTGATAAT 
GTTGTGTATC GTATGGGTTT TGCGGCTACT CGAGCAGAAG CGCGTCAACT GATCAGTCAC 
AAGGCCATTC TTGTCAATGG GGAAGTCGTT AATATTCCTT CTTATCAAGT GAAACCGGGG 
GATATTATCG AAGTTCGCAG CCGAGCAAAA GGGCAACTCC GAATTAAAGG AGCTCTAGAG 
CTAGCACAGC AACGGGCGCC TATTTCGTGG ATTGAAGTAG ATACAAAAAA AATGACAGGT 
ACATTTAAAG AGCAGCCGGA TGTAGCTGAA CTACCTGCTG AATTTAAAGT TAACCTCGTT 
GTCGAGCTTT ATTCGAAATA A 

 

Protein sequence

MARYLGPKCR LSRREKTDLQ LKSGIRAIDS KCNIERIPGM HWQRRGRTTD YGVQLRMKQM 
IKRYYDVLEK QFANYYKQAD RLKGSTGDNL LKLLESRLDN VVYRMGFAAT RAEARQLISH 
KAILVNGEVV NIPSYQVKPG DIIEVRSRAK GQLRIKGALE LAQQRAPISW IEVDTKKMTG 
TFKEQPDVAE LPAEFKVNLV VELYSK