Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1615 |
Symbol | ampE |
ID | 5459459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 1618351 |
End bp | 1619127 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | beta-lactamase induction protein |
Protein accession | YP_001424953 |
Protein GI | 154706009 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0562539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTTGA CCGCTGTTTT ATTGTGCTTG GTTATTCAGC GATGGTTACA TTTTGATAGC TATACCAGGC AATACAATTG GTTTGAACCC TACTACCAAT GGTTGAAGGC ACGTTTTGGT CAAACTTTCC ATTGGAACGG GCTTGGCGGG GTGGCGATCA TTATTCTCCC GGTCGTGTTT ATCTATATAT TAGTTGCTCT TTTCATTTGC CGCACGCTGA CCATTGTAGG GTACTATTTT TTAACCGTTG CTGTGTTATG GTATTGCATG GATGTGCGCT CCCTTGCTAA ATCCCAAAGT GGGGCGGTAG CGCAGAAGGT GCTGATTCAT GTTTATGAGC GTGTTTTTGC TTTGATTTTT TGGTTATTGA TCTTAGGCTC AACCGGTGTC GTTCTTTATA CGTTAGTCAT AACCTTGCGG CAATTTTTAG AAAAATCTCC CGCGCAGAAC AATGAAGAAG GAACAGGCCT GCTTTCAGCG GTCGCTATCG TTCAAGGCGT GTTGGATTGG CTTCCATTAC GGTTGATCGG TATTACCTTC GCGCTTGTTG GCCATTTTTC TCCAACCTTC GCCTTATGGC GGCTCAAAGT ATTAACTGGA ATTGATAAAA CGCCAGACCT AGCGGCAGCT TGTGGTTTGA CCGCGTTAGA CATGAACAAA GAAACGAAAC TTTTATCTTT AGAAGAATTA AAGAGTCTCG ATGGATTGAT TAGTCGTGCT TTATGGGTAT GGCTTGTTGT AATTGCGCTG TTTACAATTG GGCGATGGAT TGGTTAG
|
Protein sequence | MALTAVLLCL VIQRWLHFDS YTRQYNWFEP YYQWLKARFG QTFHWNGLGG VAIIILPVVF IYILVALFIC RTLTIVGYYF LTVAVLWYCM DVRSLAKSQS GAVAQKVLIH VYERVFALIF WLLILGSTGV VLYTLVITLR QFLEKSPAQN NEEGTGLLSA VAIVQGVLDW LPLRLIGITF ALVGHFSPTF ALWRLKVLTG IDKTPDLAAA CGLTALDMNK ETKLLSLEEL KSLDGLISRA LWVWLVVIAL FTIGRWIG
|
| |