Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1412 |
Symbol | rplT |
ID | 5458077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 1403771 |
End bp | 1404130 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | 50S ribosomal protein L20 |
Protein accession | YP_001424760 |
Protein GI | 154706682 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00164339 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAGAG TAAAACGAGG AGTCACCGCA AGAGCGCGGC ATAAAAAAGT ATTAACTAAA GCGAAAGGTT ATTATGGCGC GCGAAGCCGA GTGTTTCGCG TGGCTAAGCA AGCGGTTATC AAAGCTGCCC AATACGCCTA TCGGGATCGT AAGCAGCGTA AGCGCCAATT TCGCGCTTTA TGGATTGTCC GTATTAACGC AGCCGCGCGT GAGCATGGGC TTTCTTACAG CCGTTTGATT AATGGCTTAA TGAAAGCATC CGTTGCCATC GATCGTAAAA ACTTAGCGGA ATTAGCGGTG TATGATAAAG CCGCTTTTGG AAAATTAGCA GAAAAAGCTA AGCAGGCCTT AGGCGGTTAA
|
Protein sequence | MPRVKRGVTA RARHKKVLTK AKGYYGARSR VFRVAKQAVI KAAQYAYRDR KQRKRQFRAL WIVRINAAAR EHGLSYSRLI NGLMKASVAI DRKNLAELAV YDKAAFGKLA EKAKQALGG
|
| |