Gene CBUD_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCBUD_1240 
SymbolsecD 
ID5459324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCoxiella burnetii Dugway 5J108-111 
KingdomBacteria 
Replicon accessionNC_009727 
Strand
Start bp1216819 
End bp1218687 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein translocase subunit 
Protein accessionYP_001424600 
Protein GI154706864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00253338 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT ATCCGTTGTG GCGTTATATA TTACTCGCCG TACTCATCAT CATCAGTTTG 
ATTTATGCGT TACCTAACTT GTATGGGGAA GATCCGGCTA TTCAAATCTC AGCTAAGAAT
AGTGCTCCCA TTGAGGCTGT TGAAGAAAAA ATCAAATCAA CCTTAAACGC TCAACATATT
TCTTATCTTT CGGTTCGGCC TGTCGATAAT ACCGTTTTGG TTCGCTTTCC CAGTACCGAA
GATCAGCTTA AAGCGCAGGA TGTGATTCAG GCTGTCGTTG GTACTGATTA TTCCGTTGCA
TTGAATTTAG CGCCGCGGAC GCCCCGATGG TTACAGGCGA TCGGCGCAAA ACCGATGCGC
TTAGGATTGG ACCTGCGCGG CGGTATCCAT TTCTTATTAG ATGTGGATGT TGGCGCCATG
GTGAAAGCCC AGGAAACGGG CGATTTACAT ACCATGTCAA CGGCGCTTCG CGAAGCCCGC
ATTCGCTATA CAGAGATGTC AAGCGACCAA AATGGCGTAA TGATCCATTT CCGTGACCAA
GCAGCCCGTG ATCAGGCGCG CACGCTCTTG GAAAAACAAT TTCCTGACTA CCGTTTTGAA
GCCACGGCAT CGAGTCTTCG AGGCACTATT TCAATAACGG CATTGCACCA AATCCAGCAA
AATGCCGTGG ATCAAATAAC AACGATCCTC AGAAACCGTG TTAATGAGTT AGGCGTTGCG
GAACCGGTTA TCCAACAGCA AGGAGAAAGC CAAATCAGCG TTGATTTGCC TGGCATTCAA
GACACGGCTC GAGCCAAAGA TATTATTGGT AAAGTAGCGA CCATTCGTTT GCAATTGGTG
GATGTTGAAC ACGATGCTGA AACAGCCTCG AGCACGGGGA CTGTGCCTTT TGGTTCAAAA
TTATATACCT TCGAAAAGCA GCCCGTACTA TTGAAGCAGC AGGTCGTGTT AAAAGGAACT
TCGATTATTA ACGCCTCGAG TGTTATTGGA GAAGATGGCC GCCCAGCGGT GCGAGTTCGG
GTGAGTGGCA GCGATGTGCC TTCTTTTAAT CGAATTACGG GGGAAAACGT CGGCAAACCT
TTAGCCGTTG TTTACGTAGA AACTCAAACT ACGCGTCATT TAGTCGATGG AAAGGTGGTG
ACTCAACACC GCCAAATTGA GCGTATTATT AATATAGCGA CGATTCAAAC TGCTCTTGGA
AATGATTTCC AAATAACTAA CTTATCTACG ATGGATTACG CAAAAAATTT AGCCTTGTTA
TTACGCTCTG GCGCTTATCC TGTCCCCGTT GATTTTGTGC AAGAACGAGT GGTGGGCCCG
AGTTTGGGCC AAGAAAATAT CCACATGGGG GTTTTATCTA CCGAAATTGG CGCTTTATTG
GTGATTGTGT TTATGGCGTT CTACTATCGG CTGTTCGGCG TCATTGCTGA CATCGCGTTA
GCTTTGAATA TCGTCTTTAT TGTTGCGGTG TTATCCATTT TGGGTGCTAC CCTCACTTTG
CCCGGTATTG CGGGTATTGT GTTAACAGTG GGGATGGCTG TCGATGCGAA TGTGTTAATT
AACGAGCGAA TACGAGAAGA GTTGCGCAAT GGGATGTCGA CGCAAGCGAG TATCAAAGCT
GGATACGATC GGGCTTTTGC TACCATTGTG GATGCCAATG TGACCACGCT GATTGTAATG
ATTATCTTAT TTGCTTTAGG CTCGGGGCCA GTCCAAGGCT TTGCTGTGAC GACGACTATT
GGTTTGTTGT CGTCGATGGT GACAGCGATT TTCTTTACAC GGGCGGTGGT GAATTTAGTG
TACGGACGGC GCAGAGCTTC ACGTTTGTCT ATTGGGATTA ACGCAAAATC CGCAGAGGCT
AAGAAGTAA
 
Protein sequence
MNRYPLWRYI LLAVLIIISL IYALPNLYGE DPAIQISAKN SAPIEAVEEK IKSTLNAQHI 
SYLSVRPVDN TVLVRFPSTE DQLKAQDVIQ AVVGTDYSVA LNLAPRTPRW LQAIGAKPMR
LGLDLRGGIH FLLDVDVGAM VKAQETGDLH TMSTALREAR IRYTEMSSDQ NGVMIHFRDQ
AARDQARTLL EKQFPDYRFE ATASSLRGTI SITALHQIQQ NAVDQITTIL RNRVNELGVA
EPVIQQQGES QISVDLPGIQ DTARAKDIIG KVATIRLQLV DVEHDAETAS STGTVPFGSK
LYTFEKQPVL LKQQVVLKGT SIINASSVIG EDGRPAVRVR VSGSDVPSFN RITGENVGKP
LAVVYVETQT TRHLVDGKVV TQHRQIERII NIATIQTALG NDFQITNLST MDYAKNLALL
LRSGAYPVPV DFVQERVVGP SLGQENIHMG VLSTEIGALL VIVFMAFYYR LFGVIADIAL
ALNIVFIVAV LSILGATLTL PGIAGIVLTV GMAVDANVLI NERIREELRN GMSTQASIKA
GYDRAFATIV DANVTTLIVM IILFALGSGP VQGFAVTTTI GLLSSMVTAI FFTRAVVNLV
YGRRRASRLS IGINAKSAEA KK