Gene CBUD_1229 details

Gene Information

• Locus tag: CBUD_1229
• ID: 5458540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: -
• Start bp: 1204504
• End bp: 1206573
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 45%
• Product: oligopeptide transporter
• Protein accession: YP_001424589
• Protein GI: 209364005

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTGTTAA AATGTGGGAA TGATACTTTA AATAGACTCA TTCATGTAAG GACGTTTTTA 
GTGAAAAATC CCGAAAACTT AGACAGCGAA CCTCTGATCC CCGCTTCGAC CTCTCTGCCT 
GAATTTACAT TTAAAGCGAT TGTATTATCT ATCCTATTAG CTATTGTTTT ATCTGCGGCG 
AATGCTTATT TAGCTTTAAA AATTGGGACG ACAATTTCTG CATCCATTCC AGCGTCGGTT 
CTAGCGTTAG GTATTTTACG TTTTTTTAAG CAGCACAATG TGTTGGAAAG CAATTTAGTT 
CAAACGGCTG CTTCTGCGGG GGAAGGTGTG GCGGCAGCGC TAGCTTATGT TTTGCCGGCG 
ATGATTTTTC TACGTATTTG GAATGGGTTT CCCTATTGGG AGACGCTGAT TATTGCTGTG 
CTTGGGGGAC TTTTAGGCGT TTTATTTGCT GCCATATTAC GGCGAGTGAT GCTCAACCTT 
CCCGTTTTGC GTTTTCCTGA GGGAACGGCA ATTGGTAATT TGCTTAAAAT AAGTGTGAAA 
GGAAAAGGTG GATTGAAGTT GTTGGCTAAT GGCGGTGTGG TCGGCGGGAT TATTGCTTTT 
GCGCAGACGG GATTAAAAAT CGTTTCTGAT AATTTGCAAT TATGGACATT TACCGGAAAA 
ACGGTTTTTG GGTTTGGATG GGGATTCACG CCGGCCGTGT TAGCTTCGGG TTATATCGTG 
GGTTTTGAAG TGGCGGTGAG TTTTCTAATC GGCGTTACTT TGGGTTGGGT GATTATCTTA 
CCGCTCATCG GCTTATATTA TGGGTTACCC GCTAATGCGA CTTCCGCTTA TGATGCAGCA 
ACTCAATTAT GGGACGCCCA TCTTCGTTTT GTCGGGGTGG GAACCATGCT GGTAGGTGGG 
TTGTGGACAT TGTTAAATTT ATTGAAGCCA ATCATAAAAG GAGTCCATCT TTCTTTTGTT 
AATTTTCGTA AAAAATTAGG CGAAACTTCG GGACAGCGTT TGCGTATTGA AGCCGATATT 
CCTCCTGTTT GGATTATTGT CGGCGTTTTA GCGCTCATTG GATTTTCTTT CTTTTACATT 
TTTTATTATT TTCGAGAAGC TAATTTCCTG GGATCGGGGA ATTTTTTAGC CTTTGTGGCT 
TTTGTTTCGA TTATTTACAT TCTCGTGGTC GGTTTTTTGT TAGCTACTAT ATCCAGTTAC 
GTTTGCGGAC TCGTAGGATC AAGCAATAAT CCGTTATCCG GATTATTAAT TACCGCTATT 
TTATTGTTAG CATTTTTATT TCTGTTGATT TTTCACGTTC ACGGATCGGT GCAGGCGCAT 
CGCGTGGCTT CAGCGGTTAT CATTATTGCG ACGGTTTTAG CGGGCATCGG TTCGATTGCG 
GGAGAAAATA TTCAGGATTT AAAAGCAGGA AGAATGGTTG GTGCCACACC CTGGCGGCAG 
CAAGTAATGA TGGGTGTTGG TGTTATTGTA TCCGCTCTTA TTATTGGTCC CGTGCTTCAA 
CTTTTATTTA ATGCTTACGG CATGGGGGGT GTTTATCCGC GCCCTGGAAT GGATCCTTCT 
CAAATGTTAG CGGCGCCTCA ATCCGCGTTG ATGGCGGCGG TGGCGCGGGG GGTGTTAACA 
CGCCACCTCA ATTGGGACAT GGTAATAGTA GGCGCTTTCG TCGCTGTTAT TATTATCATC 
CTCGATGAAT TCCTGAAACG GCGCAATTTT CGGGTGCCGG CGTTGGCGGT GGGTCTCGCT 
ATTTATCTGC CCCCCGAGGT TATTATGCCG GTAGTGGTAG GGGGAATGAT CAGCCTTCTT 
GTCAAAAAAC CTTGGCAGCG GAAACGACGC AGTGCCGAGC AGGAACAGGA ATTAGTCCAC 
TCTCACCAAC GGGGCGTTTT GATGGCGTGC GGAATGGTGG CGGGCAGTGC GTTAATTGGC 
GTTATTTTAG CCATTCCTTT TGTTATAATG GGCACGGCAA ATGCGCTATC AATTGTAACT 
CCTCGTTTTG CTCCTATTGC TGACGTGCTA GGGGTGATTG TATTTTTAGC GCTCTGCGCT 
TGGTTTTATT ACGTGGGTCG TAAACGATGA 

 

Protein sequence

MLLKCGNDTL NRLIHVRTFL VKNPENLDSE PLIPASTSLP EFTFKAIVLS ILLAIVLSAA 
NAYLALKIGT TISASIPASV LALGILRFFK QHNVLESNLV QTAASAGEGV AAALAYVLPA 
MIFLRIWNGF PYWETLIIAV LGGLLGVLFA AILRRVMLNL PVLRFPEGTA IGNLLKISVK 
GKGGLKLLAN GGVVGGIIAF AQTGLKIVSD NLQLWTFTGK TVFGFGWGFT PAVLASGYIV 
GFEVAVSFLI GVTLGWVIIL PLIGLYYGLP ANATSAYDAA TQLWDAHLRF VGVGTMLVGG 
LWTLLNLLKP IIKGVHLSFV NFRKKLGETS GQRLRIEADI PPVWIIVGVL ALIGFSFFYI 
FYYFREANFL GSGNFLAFVA FVSIIYILVV GFLLATISSY VCGLVGSSNN PLSGLLITAI 
LLLAFLFLLI FHVHGSVQAH RVASAVIIIA TVLAGIGSIA GENIQDLKAG RMVGATPWRQ 
QVMMGVGVIV SALIIGPVLQ LLFNAYGMGG VYPRPGMDPS QMLAAPQSAL MAAVARGVLT 
RHLNWDMVIV GAFVAVIIII LDEFLKRRNF RVPALAVGLA IYLPPEVIMP VVVGGMISLL 
VKKPWQRKRR SAEQEQELVH SHQRGVLMAC GMVAGSALIG VILAIPFVIM GTANALSIVT 
PRFAPIADVL GVIVFLALCA WFYYVGRKR