Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1188 |
Symbol | |
ID | 5458402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 1160217 |
End bp | 1161434 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001424552 |
Protein GI | 209363990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0677678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATGCTC AATGGCCAGA AGGTATTATT TACTTACCCC GTAGCCGTAA AAAACGTTAT GCGAAGCGCT ATTCCAATAG AAAAAATAGA GCGCCTATTC CCAATCGAAC AGACATTGAT TTGCGTCCAG AAAAGGCAAC GAATCGGAAG GAAGTAGGCC ATTGGGAATC CGATACCCTG GAGTCGGATC GATCTCGGGT GGTTTATAAC GTCATTGAAG AGCGTGTATC TCGTTTAGTA AAGATAACCC GATTAGAAAA CAAAAAAGCA GCCTCAACCA AAGAAGCCGT TATAAAACGG TTAGCCTCTC TCCCTAAAAA GGCTCGTAAA AGCATTACTT ATGACAACGG GTCAGAAAAT TATTATCATC AAGAGATAAA TTCTGTCTTA AAAACAAAAT CCTACTTTTG CAAGCCTTAT CATAGTTGGG AAAAGGGAGC CATTGAAAAT ACCAATGGAC TCATTCGTCG ATTTATACCT AAAAAAACGG ATCTCGCCAA TTTTTCTCAG GAACAACTTG ACCAAATTGA ATATTTGTTA AATCATCGAC CACGCAAATG CCTAGGATTT AAAACCCCTT ATCAGGTCTT CCTTAAGCGA ACTGGTGCAA TTCCTCCTTG A
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Protein sequence | MFNVNAMRRW RIIIFLLSFW TLSSFANSNQ IIELHVYPHA EDCHLVFDSP SAIHFHYFEL TKPERLVVDI QQAHFIHAVK KNLSGPLIKT IRTGYHKNHT LRVVFDLKSP IKIHAVPLKP DSKSPHFRLL IDLISPSHKI KEKTKTIKNI IASPIKSPQP SRARDIIVVI DPGHGGRDPG ATGPAGAHEK DIVLKISRYL QRDINRQPGF KAYLTRKGDY YLTLRQRLAI ARRYRADMFI AVHADAYKNH RSQGASVFAL SQRGATSEAA RWLATKENES ELMGGVDLAD KNNLLKSVLI NLSQTATIRD SLHIGQRIIR ALKNIGRLHH SRVEQAAFVV LKSPDIPSLL VETGFISNPY EERKLLNPIY QQHIASALMQ GICAYFIYSP PRGTWLAQKV KWDQH
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