| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_1162 |
|---|
| Symbol | prpD |
|---|
| ID | 5458075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 1136530 |
|---|
| End bp | 1137954 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | 2-methylcitrate dehydratase |
|---|
| Protein accession | YP_001424526 |
|---|
| Protein GI | 154707237 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.696099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCTA ATCGTCCCAA CTTTGATAAG GAAATCCGAG CTATCTCCGA TTATGTTGTC
AATCATAAAA TCGAGAGTCA ACTGGCGATC GATACCGCTT ATTATTGTTT TCTGGATTCG
CTCGCCTGTG CTTTTATGGC TTTATCCAAC CCGCGTTGTA AAAAAATATT AGGCCCCGTC
GTTCCCGGTG CTTTGATGAA AAATGGCGCT CGAGTTCCAG GAACGGCGTT AGAATTGGAC
CCGGTGCAAG CTGCTTTCAA TTTTGGAACG ATGATTCGAT GGTTAGACTT TAATGATGCG
TGGTTGGCGG CAGAATGGGG CCACCCGTCG GATAATCTAG GCGGTATTTT AATGACCGCT
GATTATGTGT CACGAATGAC CCATGAAGAA GTAAAAATTA AAGACATCTT CGTTAGTATG
ATTAAAGCGC ACGAGATCCA AGGTGTGATC GCTTTGGAAA ATGCCTTCAA TCGCGTGGGT
TTAGATCATG TACTTCTTGT TAAAGTTGCT ACGACGGCGC TTGCTACGCA ACTCCTCGGC
GGCGATGAAG AAAAAATTAA TAATGCCTTA TCACTGGCTT GGATCGATGG CCAGAGTTTG
CGAACTTATC GGCATGCCCC CAATACGGGT TCGCGGAAAT CATGGGCGGC AGGTGATGCC
ACTAGCCGGG GGGTTCGTTT GGCACTGCTC GCTATGCAAG GTGAAATGGG TTATCCCACT
GCGTTGACCG CCCCTATTTG GGGATTTTAT GACGCCACTT TCCAAGGAAA ATCTTTTAAA
TTTCAACGCC CTTACGGGAG TTATGTCATG GAAAATGTGT TGTTCAAAAT TTCATTCCCT
GCGGAATTTC ATGCACAAAC AGCCGTTGAA TGTGCTCTTG CCTTACATGA TCAAGTAAAA
GATCGCCTGG ATGATGTTGA AAAGATAATC ATCAAGACGC AAGAATCAGC CGCTCGTATC
ATTGACAAAA AAGGTCCTCT GCATAACCCC GCTGACCGTG ATCATTGTAT TCAATACATG
ACCACTATCG GTTTGATCTT CGGCGAGTTA ACCGCAGAAC ATTACGAAGA TGAAATTGCT
AAAGATCCTC GTATTGATAA TTTACGCGAA AAAATGGAAG TGGTGGAAAA TCCTCAATTT
ACCAAAGATT ACCTCGATCC CGATAAACGT TCTATTGGCA ACAGCGTCCA AGTCTTTTTT
AAAGACGGCT CAAAAACCGA GGAAATTACC GTGGAATACC CCATCGGTCA CAAACGTCGT
CGTAAAGAAG GTATCCCCTT GCTGCTAGAA AAATTTAAAA ACAGCCTATT TACTCATTTC
ATCAAAGCAC AAGCTGAAAA GATTCAACTC CTCTGCGAGG ATCGTGAGAA ATTGGAAGAG
ATGACAGTGA ATGATTTTGT GGATATCGTC GCCATTAAAA TATGA
|
|---|
| Protein sequence | MKANRPNFDK EIRAISDYVV NHKIESQLAI DTAYYCFLDS LACAFMALSN PRCKKILGPV
VPGALMKNGA RVPGTALELD PVQAAFNFGT MIRWLDFNDA WLAAEWGHPS DNLGGILMTA
DYVSRMTHEE VKIKDIFVSM IKAHEIQGVI ALENAFNRVG LDHVLLVKVA TTALATQLLG
GDEEKINNAL SLAWIDGQSL RTYRHAPNTG SRKSWAAGDA TSRGVRLALL AMQGEMGYPT
ALTAPIWGFY DATFQGKSFK FQRPYGSYVM ENVLFKISFP AEFHAQTAVE CALALHDQVK
DRLDDVEKII IKTQESAARI IDKKGPLHNP ADRDHCIQYM TTIGLIFGEL TAEHYEDEIA
KDPRIDNLRE KMEVVENPQF TKDYLDPDKR SIGNSVQVFF KDGSKTEEIT VEYPIGHKRR
RKEGIPLLLE KFKNSLFTHF IKAQAEKIQL LCEDREKLEE MTVNDFVDIV AIKI
|
|---|
| |