Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0886 |
Symbol | |
ID | 5458922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 871322 |
End bp | 872653 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | leucine-rich repeat protein |
Protein accession | YP_001424269 |
Protein GI | 154707605 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.290736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAAAT CTATCAATGA AGCTAAAAGA TTAATTAAGG AGAAAATTGC TGATAGCACC GCATTAAATC GAGAGATACA AAATTTAGAA CAGAAACATG AAGAGAAAGA ACAAGGCGAG CAAAAACAGA GTGGTGCCTT AACACAGGCC TTCAACGGCG CAAGACTCAA TCGTGATTCT CTTCCAAAAA GTGCAGCGCA AGGTATGTTA CACTTGATGG ATCTTCCACC CGAATGCTTG CACCCAATAT TATTTCTCTC TGGAAATTCG AATTCATTTT TCGTGTCTCG ACAATTTGCG AAAAGTTTTT ATCAGACAAT GTTTGAAAGC TATATAGCAG ATCCATTTGT TCGTCGTTTT GTGTCACAAA GTTATATTGA AAATGAAAAT CCCAATTATA GAGAGGCTGT TCAAAACACT TATGATGCTG TAATGAAATG CGCTGCTTTG TGGGAAATAA AGGAGGATTG GTCCAAGTGG GGGAGAGGCA ACTGGGAGAG ACATTTGTCA TCAAGCGGAT TGTATATCCA TAGCGTTGCA AGAGCGATAG TATTTAAAGA AGACAGAAAC CTTGTTCTAT TCTTTGAATA TATAAGGGAG GAAGGCAATA TCAATAGTTT CGAAATTCCC AATAGTGAAC TACCCCCAAA TCCGTTCGAA CAAAATCCGT TCGAGCAACA GCTGCTACAA AATCCGGTTT TTCCACCAAA TCCGTTTGAA GAAAACGATA CGACTATTGA AGAGGCCGAA ACAATACGAA CCTGGATGAG AGAGAACCCA GACACACTTA ATCGCGTGAT TACGATTTCT TTATGGCTGA GGTTTTTATT GACTATCCCT AAAGAAATTA GTCTTTTTAC AAACTTACAA GTTCTTGAGG TTTCAGATTG CGGTATTGGA TTTTTACTGC CAGAAATAGG AAGTCTTAGA AATTTGAAAT TTCTTTGCCT CGATTTTAAT GCGATCACTG TGATTCCAGC GGAAATTGGC AATCTGACAA ATTTAAGAGA GTTATCTGTC AGAGAAAATG GCCTTTCTGC TTTACCTCCA GAAATAGGTA ATCTCATCAA TTTATGGCTC CTTATACTGG TAACGAATGG AATAACTTTT CTTCCGCCAG AAATCGGGCA GCTAGTCAAT TTGAAATTCC TTGATCTTAG TGATAATAAC ATTTCTGTTT TACCGCCAGA GTTTATTAAT TTACAACGAT TAGAATACTT ATTCCTGGGT GATATAGGAA ATTTTGAGGG CGCAGAAAAT GGGCAGCCAA TAGACTGGGA TAATCTGCCT ATCGGACAAA CGCGCTATCG TACCTGTTGT TTGTTACAAT AG
|
Protein sequence | MPKSINEAKR LIKEKIADST ALNREIQNLE QKHEEKEQGE QKQSGALTQA FNGARLNRDS LPKSAAQGML HLMDLPPECL HPILFLSGNS NSFFVSRQFA KSFYQTMFES YIADPFVRRF VSQSYIENEN PNYREAVQNT YDAVMKCAAL WEIKEDWSKW GRGNWERHLS SSGLYIHSVA RAIVFKEDRN LVLFFEYIRE EGNINSFEIP NSELPPNPFE QNPFEQQLLQ NPVFPPNPFE ENDTTIEEAE TIRTWMRENP DTLNRVITIS LWLRFLLTIP KEISLFTNLQ VLEVSDCGIG FLLPEIGSLR NLKFLCLDFN AITVIPAEIG NLTNLRELSV RENGLSALPP EIGNLINLWL LILVTNGITF LPPEIGQLVN LKFLDLSDNN ISVLPPEFIN LQRLEYLFLG DIGNFEGAEN GQPIDWDNLP IGQTRYRTCC LLQ
|
| |