| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_0819 |
|---|
| Symbol | prpB |
|---|
| ID | 5459436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 798884 |
|---|
| End bp | 799756 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | 2-methylisocitrate lyase |
|---|
| Protein accession | YP_001424206 |
|---|
| Protein GI | 154706514 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.445655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAG GAAAACTTTT TCGACAAGCG GTTGCTAACG AACATCCCTT GCAAATTGTG
GGTGCTATCA ACGCCTATTG CGCCCTATTA GCTGAAAACG TCGGGTTTAA AGCCATTTAT
TTGTCCGGCG GGGGAGTTGC TAATACGTTG GGGCTGCCGG ATCTTGGCAT TACTGATTTA
CACGATGTAT TAGAAGACGC TCGCCGTATA ACCGCTGCTA CTCATCTTCC CTTATTGGTC
GACATCGATA CGGGTTTTGG TGGCGCATTT ACTATTGCGC GCGCCATTAA AGAAATGGAG
CGAGCGCAAG TAGCGGCGGT TCATATGGAG GATCAAGTCG CGCAAAAGCG TTGTGGTCAT
CGCCCAGGTA AAGAGCTTGT GAATACGAAT GAAATGGTGG ACCGGATTAA AGCAGCGGTT
GACGTTAAGT CAAACGACTT TGTCCTAATA GCGAGAACCG ATGCTTATGC CGTGGAAGGA
TTAAAAGCAA CGATTGATCG AGCGTGTACT TACGTCGAAG CGGGTGCTGA CATGATTTTT
GCGGAAGCGT TAGAAAACAT CAATGATTAT CCCACTTTTT GTAAAGCAGT GAAGGTTCCT
GTTTTAGCTA ACATGACTGA ATTTGGTAAA ACGCCGCTTT ATACGGCTGC GCAGTTGGCT
GATCACGGCG TTAAAATGGT GCTTTATCCG CGTTCGGCTG ACCGAGCGAT GAGTAAAGCG
GCTTTAGCTG TGTATGAAGA CATAAAAAAA CACGGCGTGC AAACAGCGAG CTTACCTTTC
ATGCAAACCC GCGAAGCATT GTATGAAGTC CTAAATTATC ATGCCTACGA AGATAAATTA
AACCAATTAT TTAAGAGGAA AGAAGATGAC TAA
|
|---|
| Protein sequence | MSPGKLFRQA VANEHPLQIV GAINAYCALL AENVGFKAIY LSGGGVANTL GLPDLGITDL
HDVLEDARRI TAATHLPLLV DIDTGFGGAF TIARAIKEME RAQVAAVHME DQVAQKRCGH
RPGKELVNTN EMVDRIKAAV DVKSNDFVLI ARTDAYAVEG LKATIDRACT YVEAGADMIF
AEALENINDY PTFCKAVKVP VLANMTEFGK TPLYTAAQLA DHGVKMVLYP RSADRAMSKA
ALAVYEDIKK HGVQTASLPF MQTREALYEV LNYHAYEDKL NQLFKRKEDD
|
|---|
| |