Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0677 |
Symbol | dapD |
ID | 5457370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 657882 |
End bp | 658697 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_001424081 |
Protein GI | 154707744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.052661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATC TTAAGACCAT CATTGAAGAG GCTTACCAAA ACAAAGATAG TTTTACTACT GACACGGTAC CTAAAAAAAT ACATCAAGCG ATTCATCAAA CCATCGAACT CCTTGATAAT GGAGAACTGC GCATCGCTGA AAAACAAAAC GGTCAGTGGA ACACCAATGA ATGGGCGAAA ATGGCTATTT TGCTGTACTT TAAAACAGAG CCTCTCAAAA CGTTTGACGC AGGTTACACC TTTTTTTACG ATAAAATTCC TTTAAAATAC ACCAATAATA CTTCACAACC TCAATCCGGC GTTCGCGTCG TTCCCCACGC TATCGTTCGT AAAGGAGCTT ACTTAGCTCC AAATACGGTC TTGATGCCAA GCTACATTAA CATCGGTGCG TACGTTGATT CAGGAACCTT AATTGATACT TGGGCAACTG TCGGCTCCTG CGCGCAAATT GGAAAAAACG TTCACCTTTC TGGCGGTGCT GGTATCGGCG GCGTGCTCGA ACCATTACAA GCGCATCCGA CGATTATTGA AGATGACTGC TTTATTGGCG CACGCTCGGA AATTGTCGAA GGCGTTATGG TTGAAAAAGG TTCTGTCATT TCAATGGGCG TTTTCGTCGG TCAAAGCACG CCGATTTACA ATCGCCAAAC CCAGGAGATT ACTTACGGTC GCATTCCAGC AGGCTCCGTC GTCATTCCGG GCAGCCTCCC CTCTAAAGAC GGCCACTACA ATCGTTACAG CGCAATCATC GTTAAACAAG TAGACGAAAA AACACGAAGC AAGGTCTCTC TCAATGAATT ATTACGCGAA GGATAA
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Protein sequence | MTDLKTIIEE AYQNKDSFTT DTVPKKIHQA IHQTIELLDN GELRIAEKQN GQWNTNEWAK MAILLYFKTE PLKTFDAGYT FFYDKIPLKY TNNTSQPQSG VRVVPHAIVR KGAYLAPNTV LMPSYINIGA YVDSGTLIDT WATVGSCAQI GKNVHLSGGA GIGGVLEPLQ AHPTIIEDDC FIGARSEIVE GVMVEKGSVI SMGVFVGQST PIYNRQTQEI TYGRIPAGSV VIPGSLPSKD GHYNRYSAII VKQVDEKTRS KVSLNELLRE G
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