| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_0612 |
|---|
| Symbol | uppS |
|---|
| ID | 5459047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 592666 |
|---|
| End bp | 593379 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_001424019 |
|---|
| Protein GI | 154706962 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.204719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACCAA GACATGTTGC AATTGTAATG GACGGCAATG GTCGGTGGGC TAACCGTCGT
GGCTTGCCGC GTGTGGCGGG ACATCGCGCG GGCGCTAAAG TCGTTCGTCG AATAGTTGAA
TACGCAGCTG AAAAGCCACT CGAAGTGTTA ACGCTTTTTG CTTTTAGCAT TGAGAATCGG
GCGCGGCCCC AATCGGAAGT CAATTTTTTG ATGTCATTAT TTTTAGATTC TCTCAAAAAG
AATACCGAGG AATTGCATAA AAACAATGTG CAGCTTCGCG TAATCGGCGA TCACCGAGAA
TTTGATAAAA AAATGCTTGC GCAAATTCAA ACCTCTCAAG ATCTCACAAA GCACAATACC
GGTTTAAAAT TAATTATTGC CCTGAATTAC AGCGGCCGCT GGGATATCCT GCAGGCCGTT
CAACGAATGG CTGAGAAAAT AAAAAATCAA GAGCTTACTT CTGAATTAAT GAGCGCGGAA
TTATTTCAAA ACTATTTATG TTTAAGTGAT CTACCAGAAC CGGATTTGTT AATCCGTACA
AGTGGGGAAC AACGGTTGAG CAATTTTATG TTATGGCAAT TTGCCTATAC TGAAATTTAC
TTCACGCCCG CCCTATGGCC TGATTTTAAT GAAGAAACTT TTGATCAAGC CTTGGCGTTT
TACCGTACCC GTCAACGCCG ATTTGGCTTA ACGCCTGAAC AGGTTGAAAA ATAA
|
|---|
| Protein sequence | MIPRHVAIVM DGNGRWANRR GLPRVAGHRA GAKVVRRIVE YAAEKPLEVL TLFAFSIENR
ARPQSEVNFL MSLFLDSLKK NTEELHKNNV QLRVIGDHRE FDKKMLAQIQ TSQDLTKHNT
GLKLIIALNY SGRWDILQAV QRMAEKIKNQ ELTSELMSAE LFQNYLCLSD LPEPDLLIRT
SGEQRLSNFM LWQFAYTEIY FTPALWPDFN EETFDQALAF YRTRQRRFGL TPEQVEK
|
|---|
| |