| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CBUD_0592 |
|---|
| Symbol | sdhA |
|---|
| ID | 5457470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii Dugway 5J108-111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009727 |
|---|
| Strand | + |
|---|
| Start bp | 569627 |
|---|
| End bp | 571390 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | succinate dehydrogenase flavoprotein subunit |
|---|
| Protein accession | YP_001424001 |
|---|
| Protein GI | 154707020 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCTA TTAGAGTCAA ACAATACGAT GCTCTCATCG TAGGAGCGGG CGGGGCGGGC
CTACGCGCCG CATTGGAAAT GGCGCAATCT CGTCAGTATA AAGTCGCCGT TGTATCAAAA
GTTTTCCCCA CGCGATCGCA CACCGTTTCC GCGCAAGGTG GCATAGCGGC CGCTTTGGGC
AATGTGGTGC CGGATAAACC GATTTGGCAT ATGTTCGATA CGGTTAAAGG ATCGGACTAC
TTAGGCGATC AAGACGCCAT TCAATACATG TGTGAACAGG CCCCGCCTTC CGTGTACGAA
TTGGAACATT ACGGACTTCC CTTTTCGCGA TTGGATGACG GTCGCATCTA TCAACGCGCT
TTTGGCGGCC ACACGCGCGA TTTCGGTAAA GAAATGGCTC GGCGCACATG CGCCTGTGCA
GACCGAACCG GTCATGCCAT GCTCCATACG TTGTACCAAA AAAATGTAGA AGCAGGTACC
CATTTTTATT ATGAATGGTA TGGAATCGAT TTAGTTCGCG GTGCACAAGG CGGGATTGCC
GGCATGATCG CAATGAATAT GGAAACCAGT GAGTTGGTTT TTTTCAAATC ACGAGCGACG
ATTTTCGCCA CCGGGGGAGC GGGCCGTATT TATGAAACAA CCAGTAACGC TTATACCAAC
ACAGGTGATG GGATTGGTAT GGTGTTGCGA GCTGGGTTAC CCGTGCAAGA CATGGAGTTT
TGGCAATTCC ATCCGACGGG TATTTACGGT GTGGGTTGTT TGATTACAGA AGGCGCGCGT
GGTGAGGGCG GTTATCTTAT TAATGAAGAC GGTGAACGTT TTATGGAACG TTATTCTCCG
CATTTAAAAG ACCTCGATTG CCGCGACGTC GTTGCCCGTT CTATCTTACA AGAAGTCATG
GCCGGCGGTG GCGTTGGCCC GAAAAAAGAT CACGTCTTAC TTAAATTGGA TCATTTGGGA
GAAAAAGTAT TACGAGAGCG GCTCCCTGGT ATCATCGAAT TATCCGAAAA ATTTGCAAAC
GTCGATATCA CAAAAGAACC CATCCCTATT TTACCGACCT GCCATTACAT GATGGGTGGC
ATTCCCACCA ATATTCATGG TCAGGCGCTC ACGGTGGATG AAAATGGTAA GGATCAAATT
ATCGAAGGCC TGTTTGCCGC GGGAGAATGC GCGTGTGTTT CTGTTCATGG GGCAAATCGG
TTAGGGACTA ATTCATTATT AGACTTAGTC GTCTTTGGTC GTGCCATTGG GTTGCATTTG
GAAGAGGCCT TAAAAACCGA ATTGAAACAT CGTTCTGAAA ATCCCGATGA TATTGATGCT
GCCATCGCTC GCCTAAAACG CTGGGAAAAA CCCGATAACG TTGAAAATCC CGCATTACTT
CGACAGGAAA TGCGAAAAGC TATGTCGGAA GACTTCGGCG TGTTCCGCGA AGAGCAGAAA
ATGAAGCAGG GGCTGGAACG TCTGCAAAAA TTGAATGAAC GGTTACAGCG CGCGAAATTA
ACCGATACCA GTCGCACTTT CAACAATGCC CGAATTGAGG CCTTAGAACT CGATAATTTA
ATGGAAGTCT CTTACGCTAC CGCCGTTTCA GCGCAGCAGC GTACGGAAAG CCGAGGCGCT
CATTCCCGTT ATGATTATAA AGAACGCGAC GATGCAAATT GGCTGAAACA CACCGTTTAT
TTTCGCGACG GGCACATCGC TTACCGCCCT GTCAATATGA AACCCAAAGG GATGGACCCG
TTTCCCCCTA AATCGAGAGA TTGA
|
|---|
| Protein sequence | MSSIRVKQYD ALIVGAGGAG LRAALEMAQS RQYKVAVVSK VFPTRSHTVS AQGGIAAALG
NVVPDKPIWH MFDTVKGSDY LGDQDAIQYM CEQAPPSVYE LEHYGLPFSR LDDGRIYQRA
FGGHTRDFGK EMARRTCACA DRTGHAMLHT LYQKNVEAGT HFYYEWYGID LVRGAQGGIA
GMIAMNMETS ELVFFKSRAT IFATGGAGRI YETTSNAYTN TGDGIGMVLR AGLPVQDMEF
WQFHPTGIYG VGCLITEGAR GEGGYLINED GERFMERYSP HLKDLDCRDV VARSILQEVM
AGGGVGPKKD HVLLKLDHLG EKVLRERLPG IIELSEKFAN VDITKEPIPI LPTCHYMMGG
IPTNIHGQAL TVDENGKDQI IEGLFAAGEC ACVSVHGANR LGTNSLLDLV VFGRAIGLHL
EEALKTELKH RSENPDDIDA AIARLKRWEK PDNVENPALL RQEMRKAMSE DFGVFREEQK
MKQGLERLQK LNERLQRAKL TDTSRTFNNA RIEALELDNL MEVSYATAVS AQQRTESRGA
HSRYDYKERD DANWLKHTVY FRDGHIAYRP VNMKPKGMDP FPPKSRD
|
|---|
| |