Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0548 |
Symbol | nuoD |
ID | 5459261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 524922 |
End bp | 526196 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001423959 |
Protein GI | 209363824 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.899987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGG CGAGAAAGAA AATGGCTGAA GTTCGCAATT ACACATTTAA TTTTGGACCG CAACACCCTG CCGCGCACGG CGTTTTGCGG CTTATCGTCG AAGTGGACGG CGAAGTGATT CAGCGCATCG ATCCGCATAT CGGCCTTTTG CATCGGGCAA CCGAAAAATT AGCGGAAAGT AAGCCTTACA ATCAAACCAT TGGCTACATG GATCGACTTG ATTACGTATC CATGATGGCG AATGAACACG GCTATGTATT GGCGATCGAG AAACTCCTGG GGATCGAGCC TCCGATTCGA GCAAAATACA TCCGGACGAT GTTCGATGAA ATTACCCGAA TATTAAATCA TTTATTGTGG CTGGGCGCAC ATGCGTTGGA TGTCGGGGCG ATGACCGTAT TTCTCTATTG CTTTCGCGAG CGCGAAGATC TGATGGATTG TTATGAAGCC GTGTCCGGCG CGCGCATGCA CGCGACTTAT TATCGCCCCG GTGGGGTTTA CCGCGATTTG CCGGACAGCA TGCCAAAGTA CAAACCTTCA CGATGGCACA ATGAAAAAGC CGTCAAAAAA ATGAATGAGG CGCGTGAGGG TTCGCTATTG GATTTTATTT GGGATTTTAC TGCGCGTTTT CCCAACTTAA TTGATGAATA TGAAAGCCTC TTAACGGACA ATCGAATTTG GAAACAACGG ACGGTGGGCA TTGGTGTGGT ATCCGCAGAG CGGGCGCTGC AATTAGGCTT TACAGGCCCC ATGTTGCGGG CATCGGGCGT TGAATGGGAT CTTCGGAAAA AGCAACCGTA CGCCGCTTAT GATCGGGTGG ATTTTGATAT TCCCATCGGT CGAGAAGGCG ATTGTTACGA TCGGTATTTA GTTCGCATTG AAGAAATGCG TCAATCGAAT CGCATCATTC GACAGTGTGT CGAATGGCTG CGCAAAAACC CCGGGCCGGT CATAATCGAC GATTATAAAA TCGTACCACC GCAACGAGAA GTCATGAAGC GCGATATGGA AGCCTTAATT CATCATTTTA AATTATTCAC GGAAGGCTAT ATTGTTCCGG AAGGAGAAGC TTATGCCGCC GTGGAACAAC CAAAAGGCGA ATTCGGTGTT TATATCGTTT CAGACGGAGC GAATAAACCT TATCGAGTTA AAGTCCGTGC CGCGAGTTAT CCCCATTTAG CGGCCATGAA TGAAATGTGT CGCGGGCACA TGATTGCAGA TTTAGTCGCC ATTATTTCAA GCATTGATAT CGTCTTTGGT GAGATTGATC GGTAA
|
Protein sequence | MKKARKKMAE VRNYTFNFGP QHPAAHGVLR LIVEVDGEVI QRIDPHIGLL HRATEKLAES KPYNQTIGYM DRLDYVSMMA NEHGYVLAIE KLLGIEPPIR AKYIRTMFDE ITRILNHLLW LGAHALDVGA MTVFLYCFRE REDLMDCYEA VSGARMHATY YRPGGVYRDL PDSMPKYKPS RWHNEKAVKK MNEAREGSLL DFIWDFTARF PNLIDEYESL LTDNRIWKQR TVGIGVVSAE RALQLGFTGP MLRASGVEWD LRKKQPYAAY DRVDFDIPIG REGDCYDRYL VRIEEMRQSN RIIRQCVEWL RKNPGPVIID DYKIVPPQRE VMKRDMEALI HHFKLFTEGY IVPEGEAYAA VEQPKGEFGV YIVSDGANKP YRVKVRAASY PHLAAMNEMC RGHMIADLVA IISSIDIVFG EIDR
|
| |