Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0403 |
Symbol | shaD |
ID | 5458125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 387025 |
End bp | 388524 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | sodium/proton antiporter protein |
Protein accession | YP_001423824 |
Protein GI | 154706279 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTAT TACCAATATT ACCGTTATTA ATTTGTCTAA TTACCGCAAT CTTATGTTGT TTTTTTTGGT CGTTTGAGCG GTTACAAAAA ATCTGTCATT TAACCGGCGC AATAGTGTTA TTAATGGCGG TTATTGTGAT TCTCATTTTC GTGACGCAGA AAGGAATTTT GGTCATGCAA ATGGGGGATT ACCTCGCGCC TTTCGGAATC AGCATCGTTA TTGACCTGCT AAGCGCTATT ATGTTAGTAG TGACTGGGCT TATTGCATTA TGCGTGGCAA TTTATGCCTT ATCCGACATT AAATCCACTC AACAAAATTT AGGTTTTTAT CCGGTCTATT GGATTTTACT GGTTGGTATT TGCGGAGCTT TTTCGACAGG TGATATGTTT AACCTTTATG TTTGGTTTGA AGTGATGCTG ATTGCTTCTT TTGTGTTGAT GGCGCTCGGC AATGAACGGA TTCAGTTGGA TGGAACGATT AAATACGTAG CTATGAATTT AATTGCTACT ATTTTAATGC TAACCGCAAT TGCAATGTTG TATGGAATAG TGGGCACTTT AAACATGGCT GATTTATCGG TGCGCCTATC ACACTATCCG AACGCTTCTA TTGTAATGGC GGCTGCGCTA TTGTTGGCTA TTGCATTTTC TATTAAAACC GCTTTATTCC CTTTGTTTTT CTGGCTGCCG GCTTCTTACC ACACCACCAG CGTTTCGGCT TCTGCTATTT TTGCTGGCAT GCTGACTAAA GTCGGCGTTT ATACTTTAAT CCGATTGGTT ACCTTGATTG TTCCTAATAA TCAAATAATT TTAGGTTTAT TATTGGCTTC TTCGGGATTA ACGATGTTAA CCGGAGTATT GGGTGCAGCA TCACAATATA ATTTTCGACG AATTTTATCT TTTCACATTA TTAGTCAAAT TGGTTACATG GTGATGGGGC TTTCAATTCG TACGCCGTTG GCGTTAGCCG GCGCTGTGTT TTATATTGTG CATCATATTA TAGTTAAAAC GAATTTGTTT TTAATCAGCG GCATTACAAA CCGTTTAGGT AAAAGTTTTG ATATTCGAGC CTTAAGCGGT TTTTATCGAC AGTCCCCACT TTTAGCTATA TTATTTTTTA TCCCTGCTTT TTCCCTGGCA GGTTTTCCGC CGTTATCTGG TTTTTGGGCG AAGCTATCTT TGTTGCAAGC AGCCTTTACA AACCACAATT ATATCATTGC GGCGATTGCC TTAATCGTTA GTTTTTTAAC GCTTTATTCG ATGATTAAAA TATGGAATCA AGTTTTTTGG ACGGATAAAT CTCAATCTAA AAAAGAAGAT CACGCGTTGC TTTCAACGGG CGAAAAATTT TCTTTATTTG TTCCTGTTAT TTTATTGGTG AGTATTACTT TAGCAATCGC ATTTTTTCCC CAATTATTTT TTCAGGTAAT GAGTAAGGCA TCCTCCCAAT TATTAGATTC GAGTCAGTAT GTCCGTGCAG TTTTAGGAGA CAGGCAATGA
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Protein sequence | MKLLPILPLL ICLITAILCC FFWSFERLQK ICHLTGAIVL LMAVIVILIF VTQKGILVMQ MGDYLAPFGI SIVIDLLSAI MLVVTGLIAL CVAIYALSDI KSTQQNLGFY PVYWILLVGI CGAFSTGDMF NLYVWFEVML IASFVLMALG NERIQLDGTI KYVAMNLIAT ILMLTAIAML YGIVGTLNMA DLSVRLSHYP NASIVMAAAL LLAIAFSIKT ALFPLFFWLP ASYHTTSVSA SAIFAGMLTK VGVYTLIRLV TLIVPNNQII LGLLLASSGL TMLTGVLGAA SQYNFRRILS FHIISQIGYM VMGLSIRTPL ALAGAVFYIV HHIIVKTNLF LISGITNRLG KSFDIRALSG FYRQSPLLAI LFFIPAFSLA GFPPLSGFWA KLSLLQAAFT NHNYIIAAIA LIVSFLTLYS MIKIWNQVFW TDKSQSKKED HALLSTGEKF SLFVPVILLV SITLAIAFFP QLFFQVMSKA SSQLLDSSQY VRAVLGDRQ
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