Gene CBUD_0330 details

Gene Information

• Locus tag: CBUD_0330
• ID: 5459275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: +
• Start bp: 314513
• End bp: 315205
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 51%
• Product: peptidoglycan-specific endopeptidase, M23 family
• Protein accession: YP_001423753
• Protein GI: 154706054

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCT GTTTGGTTGT AATCATTATC GCTTTTCTGT TGTGCGGTTG TGTAGAAAGC 
AAAAACTTTG CGCCTGTTGT CAACGGCTGG CTTCAACCGA AGGCACGGTT AGGTTCTTAT 
CGGGTCAAGC AGGGGGATAC CATTTACTCG ATTGCCTGGG CGTTCGGTCT GGATTATCGA 
GCCTTAGCGG CCGCCAATCG TTTAAGCCCT CCCTATCGAA TTGAAGCGGG TCAAACTTTA 
CAAATGACGA TAATCCCTCG AGGCGCGCAC GTTTCTGGGC GTTTTGCCGC GGCTCCTAGA 
TGGCAATCTC CCCCGCCGCT GCAGCCCGTC GCCCATTGGC GATGGCCTGC CAAAGGGCGC 
CTCATTGGGC ATTATTCTGT CGGCATGGCG GGGAATCAAG GGATCAATAT TGCAGGCCAT 
TATGGTGAGG CGGTCCGCGC CGCTTCCGAT GGAGTTGTTG TATATAGTGG TGCTGGTATA 
CGAGGTTATG GTAATCTTAT AATTGTAAAG CATACGAATA CTTATTTAAG TGCTTATGCG 
TTCAACAAAC GGATCCTCGT CAAGGAAGGT AGTAGGGTTC GTGCTGGACA GAAGATTGCC 
GAGATGGGGC GTACTAACTC AGGACGAGTA ATGCTTCATT TTGAAATCCG CCGAAATGGC 
CAGCCAGTGA ATCCGCTTCG GTACTTGTCG TGA 

 

Protein sequence

MKRCLVVIII AFLLCGCVES KNFAPVVNGW LQPKARLGSY RVKQGDTIYS IAWAFGLDYR 
ALAAANRLSP PYRIEAGQTL QMTIIPRGAH VSGRFAAAPR WQSPPPLQPV AHWRWPAKGR 
LIGHYSVGMA GNQGINIAGH YGEAVRAASD GVVVYSGAGI RGYGNLIIVK HTNTYLSAYA 
FNKRILVKEG SRVRAGQKIA EMGRTNSGRV MLHFEIRRNG QPVNPLRYLS