Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0093 |
Symbol | oppA |
ID | 5459386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 86864 |
End bp | 89098 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | oligopeptide-binding protein |
Protein accession | YP_001423525 |
Protein GI | 154707212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.386924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGGA TTTCAGACGC AACTTTTTCA AAGAAAAAAA CCTTAGGACC GCTCATTGTA GCCCTTTGTT TGTTGTATAC CGGGGGCCTG GCCTCGGTTT TAAACAATCC ACATAAAAAA GAAGGCGCCC ATAACGTACG TTATGCCGCT ATCGTTGGCT TTCCCAAGTC TTTAGACCCT GCTCGCGCTT ATTCGTCCGA CGAAATTGAA ATCATTGCGC AGATTTATGA AGCACCGTTG CAATACCATT ACCTTAAAAG GCCTTATCAG TTAATTCCGC TGACAGCTAG GACGATGCCG ATAGTTTCAT ATTATGACAG GAATTGGAAT AAACTGCCGG CGAATCCAAA TCCAAGTAAA ATCGGGTACA GCGTTTATGA GATCGCTATC AAATCCGGCA TCTATTATCA AGCTCACCCG GCTTTTGCTA AAAATAAAAG AGGAAATTAT CTTTATTTAA ATCTTAATCG TCGGCCTATT CGGGGCATTC GTAACCTTAT GGATTTTCCA AAAGTCGGCA CTCGGGAATT GACGGCGGCT GATTATGTTT ATGAAATAAA ACGCCTTGCT TCTCCTAACG TTCATTCACC CATTTTTGGA TTAATGAGTA AATATATCGT TGGATTTTCG GATTATAGTG CAGAATTACA AAAAAAAATT CGTCACCAAA ATGGCTCTCA ATTTTTGGAT TTACGACGTT ACCCACTCGC TGGCGTTAAA ATCATTGATC GTTATCATTA TCGAATTGTC CTAAAAGGAG TTTATCCCCA ATTCAAATAT TGGTTAGCCA TGACTTTTTT TGCGCCTATT CCCTGGGAAG CGGATGCCTT TTATTCACAG CAAGTGTTGA TCGACAAAAA TATTACCTTA GATTTTTATC CCGTTGGGAC AGGCCCTTAT AGGTTGGTAG AGAATAATCC TCACAAACAA ATTGTATTGG TCAAAAACCC TAATTTCCAT GGGGAATGGT ATCCTTCCGA AGGCGAACCA GGAGATTTAA AAGCGGGTTA TTTGAAGGCA GCGGAAAAAC CGATGCCGTT TATTAATAAA ATAGTTTTCA CATTGGAAAA AGAAAGCATC CCGCGATGGA ATAAATTTTT GCAGGGTTAC TATGATAAAT CGGGAATTAG TCCCGAAAGT TTCGATCAAG CGATTGCGAT GGATCGAGAA GGAAAGCCGT ATTTAACGCC GGAATTAATT CGAATGGGTG TGCAATTACA AACAACCGTA GTGCCTGGAA TTTTTTATAT TGGATTTAAT ATGCTCGACA CTGTAGTGGG CGGCTATAGC GAGAAAAAGA AAAAATTGCG CCAAGCCATT GCTATTGCGT TGGACTATGA AGAGTTTATT TCTATTTTCC ACAACGGCCG GGGTATTCCC GCCCAGGGAC CTATCGCGCC GCGCATTTTT GGGTACGTTG ACGGCGCTGA AGGTATTAAT CCCTACGTGT ATGAATGGTT CGACGAAAAA CCAAAAAGGC GTTCATTAAC ACAAGCAAAA CGATTGTTAG CCGAAGCCGG ATATCCTGGT GGCGTTGATC CAAAAACAGG AAAATCGCTC ATTTTGAATT ACGACGTAGC CACAACGGGC GGCCCCGACG ATCGGGCGCG ATTTGACTGG ATAAGAAAGC AATTTGCTAA ATTGGGGATT ACTTTAAATA TTCGAGCGAC ACTTTATAAT CGCTTCCGTG AGAAAGTCCA AACGGGAAAG GCGCAAATCT TTTCGTGGGG CTGGCTTGCT GATTATCCTG ACCCCGAAAA CTTTTTATTT CTACTTTATT CGCCCAACGG AAAAGTCAAA TACGGGGGAG AAAATGCAAC AAATTATTCC AATCCCAAAG TAGACGAGCT GTTTGAAGAA ATTAGAACGT TACCTGATGG ACCTGAACGG CAGGAAAAAA TTAATCAATT AGTCGCTATT GTTCGAGAAG ACGCTCCGTG GATTTTTGGA ATGCACCCCA TCAATTTCAC CTTGAGTCAT CAATGGAACG AGCCAGCGAA ATTGCATGGC ATTGCGAATA ACACCTTAAA ATATGAACGT ATTGATCCAG AAAAGCGGGC GAAACTGCAA GAAGAGTGGA ATCAGCCAGT GATTTGGCCT TTATTAGTAA TTATCGCATT ACTAATCGTG TTATTTATTC CATTAATGAT TACCTATTGG CGTCGAGAGC GAAGGCCAAC CGTTACAATA ACATCCTTCC CGCGAAAACG AGAATCCAGG GACAAAAGTG ATTAA
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Protein sequence | MTGISDATFS KKKTLGPLIV ALCLLYTGGL ASVLNNPHKK EGAHNVRYAA IVGFPKSLDP ARAYSSDEIE IIAQIYEAPL QYHYLKRPYQ LIPLTARTMP IVSYYDRNWN KLPANPNPSK IGYSVYEIAI KSGIYYQAHP AFAKNKRGNY LYLNLNRRPI RGIRNLMDFP KVGTRELTAA DYVYEIKRLA SPNVHSPIFG LMSKYIVGFS DYSAELQKKI RHQNGSQFLD LRRYPLAGVK IIDRYHYRIV LKGVYPQFKY WLAMTFFAPI PWEADAFYSQ QVLIDKNITL DFYPVGTGPY RLVENNPHKQ IVLVKNPNFH GEWYPSEGEP GDLKAGYLKA AEKPMPFINK IVFTLEKESI PRWNKFLQGY YDKSGISPES FDQAIAMDRE GKPYLTPELI RMGVQLQTTV VPGIFYIGFN MLDTVVGGYS EKKKKLRQAI AIALDYEEFI SIFHNGRGIP AQGPIAPRIF GYVDGAEGIN PYVYEWFDEK PKRRSLTQAK RLLAEAGYPG GVDPKTGKSL ILNYDVATTG GPDDRARFDW IRKQFAKLGI TLNIRATLYN RFREKVQTGK AQIFSWGWLA DYPDPENFLF LLYSPNGKVK YGGENATNYS NPKVDELFEE IRTLPDGPER QEKINQLVAI VREDAPWIFG MHPINFTLSH QWNEPAKLHG IANNTLKYER IDPEKRAKLQ EEWNQPVIWP LLVIIALLIV LFIPLMITYW RRERRPTVTI TSFPRKRESR DKSD
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