Gene CBUD_0024 details

Gene Information

• Locus tag: CBUD_0024
• ID: 5458640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009727
• Strand: +
• Start bp: 28427
• End bp: 30370
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 43%
• Product: lysine-specific permease
• Protein accession: YP_001423460
• Protein GI: 154705832

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCGTA TACGTGAGCT GATTATCGGA AAACCTCGTG ATCCCATGAA AAAGGATACG 
CGTAAGCATA TCGCTTTAGT GGCATTTCTG GCGTGGATCG GATTAGGCGC AGACGGTCTC 
TCCTCTTCTT GTTATGGTCC TGAACAGGCA TTTTATGCCT TAGGCCAACA TACACACCTT 
GCACTCTTTT TGGCTTTAGC CACCGCCATC ACAGTTTTTT TAATCGCGCT GGCTTACAAC 
CAAGTCATTA AATTATTTCC CAATGGGGGA GGGGGTTATA AAGTAGCCAC CCAATTGTTA 
GGACCTTATT CGGGACTCGT ATCGGGCGCC GCTTTACTGA TTGACTACAT TCTAACGATT 
GCCATTTCAA TTGCTGCGGG AACCGATGCT ATTTTCAGTT TGCTACCCCT CAAATATTTA 
CCTTATAAGC TCGTGGTAGA ACCGATTGTT TTATTGTTGT TATTAATGCT GAACCTACGG 
GGAGCCAAAG AATCAATAAA AGTGTTGATG ATTATTTTCC TGGGATTTTT TATTACTCAC 
ATCATTGTGA TTACTGCCGG CATTATTTTA CACAACTACG GTATTAAAAC CGTTATTCAG 
AATTCCTATG TAGAAACTTT TCATCATGCA AGGATATTCG GATGGTTTTT CGTATTGGCC 
TTATTTATGC GGGCTTATTC TTTAGGTGCT GGTACATACA CCGGCTTAGA AGCCGTTTCC 
AATAACGTAA ATATCCTTGC CGAACCCCGC GTTAAAACAG GTTCATTAAC CATGCTTTAC 
ATGGCCATTT CATTAAGTTT GGTGGCCGGA GGCATTATTT TACTTTATTT ACTGTGGGGT 
GCTCATCCCG TCCCAGGACA AACGCTCAAT GCGGTCGTTT TTGAATCCAT TTTACAAACG 
TGGCCTTATC ATCACTTTTT ATTATTGGTA TTAATGGCAT TGGAAGCGGG ACTTTTAGTT 
GTCGCCGCCA ATACGGGCTT CCTCGGCGGC CCTGCGGTTT TAGCGAATAT GTCTATCGAT 
TCGTGGGTGC CTCATCGCTT TGGCATGCTG TCCAGTCGAT TGGTCACTCA AAATGGTCTG 
CTATTTTTTG GATTAGCCGC GTTACTTATT TTATTTGCCA CCGACGGCCG CGTGGAATTT 
CTCGTTGTCC TATATAGCAT GAATGTGTTT TTGACTTTTA GCATGTCATT GCTGGGGCTT 
GCTGTTTATT GGATACGGCA TCGAAAATAC GAAAAATATT GGTTCCCTCA GTGGCTGTTA 
GCGGTGATCG CGTTGATTGT CTGCGTTTCT ATTCTTATCG TTACTTTGAT ATCGAAATTT 
GAATTGGGTG GTTGGATTAC CGTCGTGGTA ACCGGCGCTG CGATCGCAGG CGGCATTGTT 
ATTAAACGTC ATTACCGCCG TTACAACGAA CTAAAAAAGA AGCTCAACCA GGAATTACGG 
ATTCCGTTGG TGAGCAAGGA AGCGGCTATT CCCTCTATCG ATCCCAAAAA GCCAACCGCT 
GTTTTTCTTG TAAAAGAAAT CGGCGCAGCT ATGCATTCTT TACTGTGGGT CACTCGGATG 
TTCCCTAATT ATTTTCATAA TTTTATTTTC ATTAGCACTG GCGAAGTTGA TATCGGTAGC 
TTTGGTAGCG ATGCAGCGCT TTCAAAATTA AAAGAACAAA CGGATGCGAT TCTGGATTAT 
TTAGTCAAAT ACTCCCAAAT GCACGGCATC GCCGCCGAAT CCTATAGCGG CTTTGGCACG 
GATGCCGTCG ATCAAATTAT GCAGATCTCT GAAAAAGTTA ATAAAAAATT CCCCACCGCC 
ATTTATTTCT CTTCCCGCTA TGTTTACCCC ACTGAAAATT GGTTCACCCG CTTATTACAC 
ACCGACCTCG CTAACATCAT CCAACGCCGC CTGCACACGC TGGGAGCTAA GATGTTGATA 
TTGCCATTAA AATTAAAGAC ATGA 

 

Protein sequence

MRRIRELIIG KPRDPMKKDT RKHIALVAFL AWIGLGADGL SSSCYGPEQA FYALGQHTHL 
ALFLALATAI TVFLIALAYN QVIKLFPNGG GGYKVATQLL GPYSGLVSGA ALLIDYILTI 
AISIAAGTDA IFSLLPLKYL PYKLVVEPIV LLLLLMLNLR GAKESIKVLM IIFLGFFITH 
IIVITAGIIL HNYGIKTVIQ NSYVETFHHA RIFGWFFVLA LFMRAYSLGA GTYTGLEAVS 
NNVNILAEPR VKTGSLTMLY MAISLSLVAG GIILLYLLWG AHPVPGQTLN AVVFESILQT 
WPYHHFLLLV LMALEAGLLV VAANTGFLGG PAVLANMSID SWVPHRFGML SSRLVTQNGL 
LFFGLAALLI LFATDGRVEF LVVLYSMNVF LTFSMSLLGL AVYWIRHRKY EKYWFPQWLL 
AVIALIVCVS ILIVTLISKF ELGGWITVVV TGAAIAGGIV IKRHYRRYNE LKKKLNQELR 
IPLVSKEAAI PSIDPKKPTA VFLVKEIGAA MHSLLWVTRM FPNYFHNFIF ISTGEVDIGS 
FGSDAALSKL KEQTDAILDY LVKYSQMHGI AAESYSGFGT DAVDQIMQIS EKVNKKFPTA 
IYFSSRYVYP TENWFTRLLH TDLANIIQRR LHTLGAKMLI LPLKLKT