Gene CBUD_A0038 details

Gene Information

• Locus tag: CBUD_A0038
• ID: 6966007
• Is gene spliced: No
• Is pseudo gene: Yes
• Organism name: Coxiella burnetii Dugway 5J108-111
• Kingdom: Bacteria
• Replicon accession: NC_009726
• Strand: +
• Start bp: 26010
• End bp: 31033
• Gene Length: 5024 bp
• GC content: 47%

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.321476
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAT TACCTTATAC CCAAGCGACA AATTTTATCA GTGCTGTACA GGGAGGTGTC 
GATCCTAGAA CCGGCCTGTT TACGGTGAAC ATGGTTCTGG CCGAATTAAC TGGAAATGAC 
AACCTTGGAC CTGATTTTCT TTTCACGTTG AATTATTCAC CTTTAAGCAC TAGCAATATA 
TGTGGATTTG GCATTGGGTG TTCTGTTGGA ATTTCTATTT ACGATAAAAA TAATAAATTG 
CTTTTATTAA GCAGCGGCGA GCGATACAAG ACAGAAGATT GGAATGACGG TGTCTATGTT 
AGACAGAAAA AAATAAATAA TTTTAAATTT GAAAAAATAA AGAACGGTTA TATTATAAAA 
TATAAGAATG GAAAAACGGA GTATCTTTAT AAATATGGCG ATAACCTGTT TCTGCCTCAG 
AAAATTTTTT CCCCGCTCGG ATGGCCGCTT AAATTGACCT GGGAAAATAG AGGGCAGTAC 
GTTAATTTAA CAAAAATTGA AGATGCTAAG GATGTCCTAT GTAAAATAGA TTATCAGTTT 
TCAGATTGGG CTAGGATAAC GTTTTGGCCA GGAAAAACAG AAAGCTATAC GTTTCAATTG 
GATTTTGTTA ATGAATATCT CTATTGGGTG ACGAATAAAT CGACCTCTCG GGAGCTGGTT 
TGGTCGTTTA ATTATGACGA TGTTGGTGCG GGTAATTTTA CCCTGACGCA AGTAAAGTCA 
CCAACTGGAC TGACCGAAAC GGTTAATTAT CAAGCCGGCG TAATGCGATT TCCTGATGAG 
TCTGGTAAAC CAGCATTACC GTCCGTTTAT AATTATCGTC AATCCCCGGG TATGGGACAA 
CCGGATATAG TCAAAGAATA CGAATATACA GCATCGAATT ATTTGGGGTA TGGTGCATCC 
TTGGGTAAGG CGTGGAATGA AGATGAGGAC AATATTTATA ACGTAGTAAT GGATGATTAT 
ACCTATAGTT CAACAGAAAA GCTTATTGTC GATAATAGAG AATTGGTTTC AATAGGTAGA 
ATTTATAATA GTTATTACTT ATTGATATCT GAGACCACTC GACAAAATTC GTGTGAGGTA 
ATTGTAGAAA CTGATTATTA CGCCAAACCA GGGCTTTCAT TTGATAAACA GCCGAAACAA 
TTTCAACTCC CCAAGGAAGA GAAAAAAACT TGGCGCGAAA ACTCGAAAAA TCAATGCCGC 
AGTGAAATCA CTACAGCCAC CTTCGACCCA GAGGGCAACC TGCTAACAAA GATTGAACCC 
GACGGAACAA AAACAGAATA CATTTATTAC GATAGCAAGG GAGAGACGGA TAAAGGTATT 
GTACTTTGTC CGCCAGAACC CAATGGCTTT GTGCGCTTCG TTAAAACTCA AATTGTCACG 
CCCGCTGATT CTGAATTTTA TGCACCCGTA CAACAGACAA CATACGCTTA TGCTCAATAT 
CCTTGTATTG CTGGTTCTTC CTTATCTTAT GCAGTCTTGC AGACACAAGA AACACTTTGC 
AGTGACGATG TTTTACTTTT AACAATAAAT ACTGATTATA TTATATTAAT GATCCTACCC 
AGTCTGAGCA CGGAAGAATG AAACGTAGTG CGGAAGTGCT TACCAGTAAG GAGGGAAAGA 
AATATCAAAA CCAAACCACC TTCGCATTTA GTTCGCAAGC GGAGCATCTT TTACAAAAAA 
TCGACTTTAC AGGCGGTGAC GGTATAAAAA CATCAATAAG TCGTGAGCAA TCCCGTTACA 
GTGGCCGGCT TCTCTCTTCC ACGGATGAGC TTGGCAACGT GACTCAATAT GAATATGACG 
AATTGGGCCG TCTTTTGACA CAGACTGTCA ATGCATCGTC AACGACTTAC GCCAGCACGA 
CACGTTACTC TTATAGTTTA GAGACAGATG CACGAGGCAA AGTAACGGCT ATCAAAACGA 
CGGTTACCGA CCCAAAAGGC AATCAGCTGC GCACCTACTA TGATGGTCTT GGCCGCAATC 
TTAAGCAGGA GCGGCTGGAT AAGGATGCCG CTGTATCACA AAAGACGGGC ACTTGGTATA 
TAACGCACCA ACAACAGTAC GACGCGCTGG GGCGTGAGAG CAAAACAATT ACTCAAGATG 
TCCTGCGCCT TGACAGCGAG GTAGGTCATG CCGGTTCCGT CCTCTCAACT TCTAAGGTGA 
TGCACTATGA CAGCTGGGGT CAGAACCATC TGACGGTCTT TAGCGACGGC TACCAGGAAC 
GATCTGTTTA CGATCCGATC ACCCGGCGCG CAACCCTACA ACCCGAAAGT GGCAGCCAGA 
AACTGGGCCA ACAGCTTACT GAATATAACC TTGCCGGTCT GCCCATCAAA GTTACGCAGT 
ATGATAGTCA AGGCACAGAG CAAGGCAGCG CACATTATGA ATATGACGGT TTAGGACAGC 
TGCGTAAAGA AACGGACGAA TTGGGCCAGG TAACGCTGTA CGAATACGAT CATTTTGGAC 
GTGTGACCCA AACCACGCTC CCTGAAAACA CCATTATCCA AAAGTCTTAC GCTCCCCAAT 
CGACGGCGTC CCTGATAACC GGGATTTCGG TCAACAATTT TTCAATGGGG AACCAAACCT 
TTGACAGTTT GGAGCGACTC ACTGAGACAA CCAGTGGCGG GCGCACCTCT GCATTTTCTT 
ATGAAAACGC ATCATCTGTT CCCGCGGCGG TAACTGCGCC GACTGGTGAG ACGGTTTCGT 
ACGAGTATCT AAAAGAACTG GGCAATGCAG TGAAAAAAAT CAGCGCGCCG GAAATTCTCC 
AAACATGGGA CTATGATGCG CTGACCGGCG CCATGACCTC GGCAACGCAA GCCGCGGGGA 
TGATCCGTCA GATGACCTAT TATCCGTCCG GTTTGCTTAA GAACGAAACG TCCATGCCCG 
ATGGCGCCGC CCAGAAGTCT ACCGCCTACA CCTATTCACT GGCCGGCGCT CCACAGTCCT 
ATACGGACGT GTTCGGTGTG ACGCAACGCT ACGATTACGA CGAACATGGC CGTCGCATTG 
GCATCGAAGA TAACGATATC AAGGTGTCAC TCGGCTATGA TGCGTTCGGT CGCTTCACGA 
AACAGCAGGC CACGGATAAA AAAACGGGCG CAGTACTGAG CACTACGCTG ACCTACGATG 
ATCTGAATCG AGAAATCAAG CGCGAAATCA GTGCAAGTGG CCAATCTGTG CTTGTCATTG 
AACAAACTTA CCAAAGAAAT CACTTGCTCA AAGAGCGAAT TACTCAGCGC GGCCGCACAA 
CCTTACGCAA AGAAGTGTTC GCTTATGACA GCCGCAACCG GCTCATCGAA TATACTTGCA 
ATAGAGAAGC ACGACCCCAA GACCCTTACG GCAAAGCCAT CCATCGCCAG ACCTTCAGCT 
ACGATGCACT GGGTAATATG ACAAAAACAC AAACCGACTT CAGCGGCGGG CGCAACACCG 
CCACCTATAT CTATAGCGCG ATTGACCCCA CTCAACTGCT CAAGGTAAAC AACGATCACA 
GCGATTATCC GAAAGAAATC ACGCTCGAAT ATGACAAAGC AGGGCGGATG ATTCGGGATG 
AAGCCGGTCG CACGTTGCGT TACGACGCGT TGGGCCGGCT ACAGCAAGTG AATGGTGCGG 
GCGCAAAAGG CGGTCAATAT GCGTATGACG CGCTCAATAC GCTGGTCAGC CAAGTGGTTC 
AGGATGAACC GATTTATGAC CTTTACTATC GTGCGGATGA TCTGGTAGGC GAGGCCCGTC 
GCGATGGCAG CAGCCAGACC CGCTATGTGA AGTCGAATGG GTGCTGTGTG GGACAATGCA 
CGAAGCAGGG ATCATCGAAC ACCAGCCGGC TAACGACCAC TAATCAGCAA GGCAGTGTGC 
TATCAGTCTC AGAAGGTAAC CATGCATCGC AGGATTGTAT CTATACACCT TATGGTTATC 
GAACCCCACA GACCGAAACG CCATCCGTCC TGGGATTTAA TGGGGAGCGG CTGGACCCGG 
TTAGTGGTAC CTATCATTTG GGCAATGGCT ACCGCGCCTA CAATCCGATA CTGATGCGCT 
TTAACTGCCC AGACAGCTGG AGCCCGTTTG GTGCGGGGGG AATTAACCCT TATGCGTATT 
GCGACGGCGA TCCGATCAAT CGCGTGGATC CAAATGGCCA TTTAAGTTGG CCGGCGGAGC 
TCGGTATTGG CTTGGGTGTC GTCGGCCTAG TTTTGGCTGT CTTTACCGCC GGCACATCCA 
TTGCGGCTGC CGGTGCAATT AGCGCAGCCA TTGAGAGTGC TTCGGCAATC TCTTTGGTGG 
TGGGAACCCT CGGCGTCGCG GCGGATGTGG CAAGCATCGC TAGCGGCGCG CTTGAAGATG 
CCAATCCGCA AGCGTCGGCA ACCCTGGGAT GGATCTCCCT GGGATTGGGC GGACCGGGAG 
CCGTCAGCGG CCTGGCCACT GCAGCTAGAG CGGGCAAAAA ATTAATCTCC GGGCTAGCCA 
AGGGCGGCGG TAAAATCAGG TCACAAAGTC CAGTGCAGGG AATTAGTTAT AGAAGTCTAT 
CTAGGTGGGA CCCTCTTAGG GGAGGACCAC CACACTTTCA AAGTTTGAGT AGGGTTACCG 
TGGCCCCCGA ATCGATGCGC CCCGCTGGAC TCAATTATTG GCACAAAGTT AGTCAGAAAA 
GCTCGCTCGG GTATCAACAT GTTTTTGGGG CTGACAGAGA AATATTTGGA TATGAAATAC 
GGGAGCCTAT AGAGTTTTTC AGAAGAAGAC CCAGCATCAC AAAACGCGAT ATAGTGATTC 
TATCGGGTAC TCATGGTCGT GTACATGGCG ATAATTGGAC AAGTCAAGGG TTACGTAGGC 
CTGACATACT TGAGCGGGCT TTTTATATAG AAGACGTACA AAATTATAAA GGACAATTGA 
ACGGGCGAGT TAAGATCGTG GATATGGCTG GTATGACAGA GAGCGAATTT GGACGTCATG 
TCAGAAATGT AAATCAACAT GTAATTTTGG GGTATTGCTG GGGACGTAAT GACGAGGCGC 
TAACGTATCA TAGAAATTTG CGTCCCGTTA TAAGTTACTG GTAA 

 

Protein sequence