Gene Xaut_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4780 
Symbol 
ID5421014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp5305295 
End bp5305477 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content67% 
IMG OID640884043 
Productribosomal protein L30 
Protein accessionYP_001419655 
Protein GI154248697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.986627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000475085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACA AGACAGTCAC CGTGGAGCAG ATCGGCTCGC CGATCCGCCG CCCGTTCGAC 
CAGGAAGCAA CCCTGGTCGG GCTCGGGCTG AACAAGCGGC ATCGCCGCTC CACCCTCAAG
GATACCCCGG CCGTGCGCGG CATGATCGCG AAGGTCGCCC ACCTCGTCCG CGTGGTCGAG
TGA
 
Protein sequence
MSDKTVTVEQ IGSPIRRPFD QEATLVGLGL NKRHRRSTLK DTPAVRGMIA KVAHLVRVVE