| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4774 |
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| Symbol | |
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| ID | 5420663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 5299742 |
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| End bp | 5300758 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640884037 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001419649 |
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| Protein GI | 154248691 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000131409 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATTCAGA AGAACTGGCA AGAGCTGATC AAGCCCGAGA AGCTGCAGGT CAATCCCGGT
CACGATCCCA AGCGCTTCGC GACCGTGATT GCCGAGCCGC TGGAGCGTGG CTTCGGTATG
ACGCTGGGCA ATGCCCTGCG CCGCATCCTG CTGTCGTCGC TTCAGGGCGC GGCCGTGACG
TCGATCCACA TCGACGGCGT GCTGCACGAG TTCTCGTCCA TTCCCGGCGT GCGTGAAGAT
GTCACCGACA TCATCCTCAA CGTGAAGGAT GTGGCCATCC GCATGCAGGG CGATGGCCCC
AAGCGCATGG TGGCCAAGAA GACTGGCCCG GGCGTGCTCC TGGCCGGCGA CATCCAGACC
GTGGGCGACG TGGCCATCCT CAACCCGAAC CTGCCCATCT GCACCCTCGA CGAGGGCGCG
GAGCTGCGGA TCGAGTTCAC GGTGGACACC GGCAAGGGCT ATGTCGCCGC CGACCGCAAC
CGGCCCGAGG ACGCGCCGAT CGGCCTGATC CCGATCGACA GCCTCTATTC GCCGGTGCGC
AAGGTCTCCT ACAAGGTCGA GAACACCCGT GAGGGCCAGA TCCTCGACTA TGACAAGCTG
ACGCTCCAGA TCGAGACCAA CGGCTCGATC ACGGCCGAGG ACGCGCTCGC CTATGCGGCG
CGCATCCTGC AGGACCAGCT GGAGATCTTC GTCAACTTCG AGGAGCCCAA GCGCGAGAGC
GAGACCACCG CGATCCAGAC GCTGCCGTTC TCCCCGGCGC TGCTGAAGAA GGTGGACGAG
TTGGAGCTGT CCGTGCGCTC GGCCAACTGC CTGAAGAACG ACAACATCGT CTACATCGGC
GACCTGATCC AGAAGAGCGA GACGGAGATG CTCCGCACGC CCAACTTCGG ACGGAAGTCG
CTCAACGAGA TCAAGGAAGT GCTCGCCTCC CTCGGCCTGC ATCTGGGCAT GGAAGTGCCC
GGCTGGCCGC CGGAGAATAT CGAAGAGCTG GCGAAGCGCT TCGAAGAACA CTACTGA
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| Protein sequence | MIQKNWQELI KPEKLQVNPG HDPKRFATVI AEPLERGFGM TLGNALRRIL LSSLQGAAVT
SIHIDGVLHE FSSIPGVRED VTDIILNVKD VAIRMQGDGP KRMVAKKTGP GVLLAGDIQT
VGDVAILNPN LPICTLDEGA ELRIEFTVDT GKGYVAADRN RPEDAPIGLI PIDSLYSPVR
KVSYKVENTR EGQILDYDKL TLQIETNGSI TAEDALAYAA RILQDQLEIF VNFEEPKRES
ETTAIQTLPF SPALLKKVDE LELSVRSANC LKNDNIVYIG DLIQKSETEM LRTPNFGRKS
LNEIKEVLAS LGLHLGMEVP GWPPENIEEL AKRFEEHY
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