Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4767 |
Symbol | |
ID | 5421507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 5292966 |
End bp | 5294060 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640884031 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001419643 |
Protein GI | 154248685 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.305838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0012362 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGTCG CGATGAAGAC CGTGGCCGAG GACGAGGCTG GCATGCGCCT CGACCGCTGG TTCAAGGTCC ATTTTCCTGA TCTCTCCTTC GGCCACCTGC AGAAGCTGGT GCGCACCGGG CAAGTGCGCG TGGACGGGGG ACGGGTGAAG ACTTCGTCCC GCGTCGAGCC CGGCCAGAGC GTGCGCATTC CCCCCCTGGG CGACGAGCCG CAGGACGAAC CGGCCGGAAA GCCGGGCGCC GCGGGCAAGG CGTCCGAAGC GGGCCGGGTT TCCGCGGGGG GCGAGGCCTC GGGTACCACA GAGGCGCCGG CCAAGCCGCG GCAATCCGCC AGCGCCGCCA AGCGCAAGGA GGACGAGGAC CGCGCCTTCC TGAAATCCAT CACCCTGTTC GAGGACAAGG ACGTGATGGT GCTGAACAAG CCCTACGGCC TCGCGGTGCA GGGCGGCTCG GGCACCTACC GGCATATGGA CGGCATCCTG GAGGTGCTGC GCGACAAGGA CGGCCAGAAG CCGCGCCTCG TCCACCGCAT CGACAAGGAC ACCTCCGGCT GCCTGCTGGT GGCCAAGACG CGGTTCGCCG CCTCGGTGCT GGCCAAGAGC TTCCGCTCGC GGGAGGCGCG CAAGGTGTAT TGGGCGGTGG TGCCCGGCGT GCCCAAGCCC AAGCAGGGGC GCATCTCCAC CTATCTCGCC CGCGACGAGG ACGAGGAGAA GATGCGGGTC GCCCGCCATG GCGAGGACGA GGCGAGCCAC GCGATCACTT ATTATGCCGT AGTGGATCAG GCGGCGCAGA AGATGAGCTG GCTGTCGCTG AAGCCGGTGA CAGGCCGCAC CCACCAGCTG CGCGCGCACC TCGCCCATAT CGGCCACCCC ATCGTCGGCG ACCCCAAGTA TTTCGATATC GAGAACTGGG AACTGCCGGG CGGCCTGCAG AACCGCCTGC ACCTTCTGGC GCGGCGGCTC GTTATTCCCC ATCCGCGCGG GCAGGGGCTG ATCGACGTGT CGGCGCCGCT CCCCCACCAC ATGGCGCAAT CCTTCGCCGT GCTGGGCTTC GACGCGTCAC AGTACGATCC CATCCTCGAG GCGCCGGAGG GATGA
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Protein sequence | MAVAMKTVAE DEAGMRLDRW FKVHFPDLSF GHLQKLVRTG QVRVDGGRVK TSSRVEPGQS VRIPPLGDEP QDEPAGKPGA AGKASEAGRV SAGGEASGTT EAPAKPRQSA SAAKRKEDED RAFLKSITLF EDKDVMVLNK PYGLAVQGGS GTYRHMDGIL EVLRDKDGQK PRLVHRIDKD TSGCLLVAKT RFAASVLAKS FRSREARKVY WAVVPGVPKP KQGRISTYLA RDEDEEKMRV ARHGEDEASH AITYYAVVDQ AAQKMSWLSL KPVTGRTHQL RAHLAHIGHP IVGDPKYFDI ENWELPGGLQ NRLHLLARRL VIPHPRGQGL IDVSAPLPHH MAQSFAVLGF DASQYDPILE APEG
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