Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4711 |
Symbol | |
ID | 5423041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 5224536 |
End bp | 5225222 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640883975 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001419587 |
Protein GI | 154248629 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.133874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGTGG CCGAGACCGC GCCGGAGACC GCACCCCTGC CGCCCCGCCG TCGCGGGCGC CCGCCCAAGA TCGCGGGGCC TGGCGGCGCC GCCGCGCGGC TGGGCCGGCC GCCGCTCATG GCAGACCCGC GCGCGGAAAT CCTGCGCCAG GCGGCGCAGC TGTTCGCGCA GAAGGGCTAT GTGGAAAGCT CGCTCAACGA GCTGGCCGCC GCCATGAACT ATTCCAAGGG CGCCATCTAC AATTACTTCT CCTCCAAGCA GGAGATCTAC GATGCCATCA TCATCTTCAC CCTGACCGGC CTCTACGAAA CCGGCGCCAA GGCTGTGAAC GAGGCCGATC CGCCGGTGGA GCGCCTCAAG CAGTTCATGA TGGCCCACGC CCGCTTCCTG GCGGACAATT ACGATTGCTT CGTCACCATG CTGGTGGGGT TCTCCGGCAT GGCCAACAGC GGCCTCAAGG ACGATGCCCT CGCCCTGCGC GATGCCCATG AGGGCCTGCT GCGGCGGATC CTCCAGGACG GCGTCGCGGA CGGCTCGTTC CGGGAGGTGA GCGCCGCGAT GACCGGCCGC GCGGTGCTCT CGCTGCTGAG CTGGATGGTC CGCTGGTTCA AGCCCGACGG CGGCAAATCC GCCGAGGAGG TGGCACTGGA GTATCACGAC CTGCTGGTGC GCGGCCTGAT GGCCTGA
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Protein sequence | MPVAETAPET APLPPRRRGR PPKIAGPGGA AARLGRPPLM ADPRAEILRQ AAQLFAQKGY VESSLNELAA AMNYSKGAIY NYFSSKQEIY DAIIIFTLTG LYETGAKAVN EADPPVERLK QFMMAHARFL ADNYDCFVTM LVGFSGMANS GLKDDALALR DAHEGLLRRI LQDGVADGSF REVSAAMTGR AVLSLLSWMV RWFKPDGGKS AEEVALEYHD LLVRGLMA
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