| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4679 |
|---|
| Symbol | |
|---|
| ID | 5424982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 5183503 |
|---|
| End bp | 5184519 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640883943 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_001419556 |
|---|
| Protein GI | 154248598 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.60579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTGC TTGTGACCGG CGGTGCCGGC TATATCGGAA GCCATGCTGT TCTCGAGCTG
GTCGGGCGCG GGGAAAGCGT CACCGTGCTG GACGACCTCT CCACCGGCTT CGACTGGGCC
GTGCCGGAAG CGATCGACCT GGTGGTGGGT GACGTGGGCG ACGCCGTTTT CATGCGGCGC
CTGCTGGAAG AGCGCGGCAT CACCGAGATC ATCCATTTCG CGGCCCGGAG CCTGGTGGCG
GAATCGGTGG CGGACCCGCT CGGCTATTAT TTCGGCAACA TCGTGAAGAC CCGCACCCTG
ATCCAGACCG CGATCGAGGC CGGGGTGACG CGGATGATTT TTTCCTCCTC CGCCTCGGTC
TACGGCGAGC CGGTGGTGGA CATCATCGGC GAGGACGAGC CCACCGTCCC CATCAATCCC
TACGGCCGCT CCAAGCTGGC GAGCGAATGG ATGCTGGAGG ACGCGGCCCG CGCCCACGGC
CTCGTCTACA CGGCGCTGCG CTATTTCAAC GTGGCCGGCG CCGATCCGCT GGGGCGCTCG
GGCCAGTCGT CCCGCGTCGC CACCCACCTC ATCAAGATCG CGAGTCAGGT GGCGGCGGGC
GCAAGGCCGG GCCTTGAGAT CTACGGCACC GACTATCCTA CGCGGGATGG CACCTGCATC
CGCGACTATA TCCACGTCAC CGATCTCGCC CGGGCCCATG TGGCGGCGCT GGAGCGCCTG
CGGGCCGGCG GCGGGAGCCT GAAGGTGAAT TGCGGCTACG GCCGCGGCTA TTCCGTGAAG
GAGGTGGTGG ACGTGGTGAA GGAGGTGTCC GGCATCGACT TTCCGGTGAC GCTCTCGCCG
CGTCGGCCGG GCGATCCGGC TTGCCTGGTG GCCAGGGCCG ACCGCGTTCG CGCCGAACTC
GGTTGGGAAC CGACCCTCGA CCATCTGCCC ACCATCGTCG GTCATGCCAT CGAGTGGGAA
AAGCGCCTGG AACGGCGCAA GGCCGCGCAA CGGGCCGCCG CCAGCAGCGT GGCCTGA
|
|---|
| Protein sequence | MSVLVTGGAG YIGSHAVLEL VGRGESVTVL DDLSTGFDWA VPEAIDLVVG DVGDAVFMRR
LLEERGITEI IHFAARSLVA ESVADPLGYY FGNIVKTRTL IQTAIEAGVT RMIFSSSASV
YGEPVVDIIG EDEPTVPINP YGRSKLASEW MLEDAARAHG LVYTALRYFN VAGADPLGRS
GQSSRVATHL IKIASQVAAG ARPGLEIYGT DYPTRDGTCI RDYIHVTDLA RAHVAALERL
RAGGGSLKVN CGYGRGYSVK EVVDVVKEVS GIDFPVTLSP RRPGDPACLV ARADRVRAEL
GWEPTLDHLP TIVGHAIEWE KRLERRKAAQ RAAASSVA
|
|---|
| |