| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4677 |
|---|
| Symbol | |
|---|
| ID | 5424980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5181427 |
|---|
| End bp | 5182455 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640883941 |
|---|
| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_001419554 |
|---|
| Protein GI | 154248596 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.889412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTA ACGGCCTTGT GGACTCCATC GGCAACACCC CCCTCATCCG CCTGAAGCGT
GCCTCCGAAG AGACCGGCTG CGAGATCCTC GGCAAGGCCG AGTTCCTCAA TCCCGGCCAG
TCGGTGAAGG ACCGCGCGGC CCTCGGCATC ATCAAGGACG CTGTGGCGCG CGGGGCACTG
AAGCCCGGTG GCGTCATCGT GGAAGGCACC GCCGGCAATA CCGGCATCGG CCTCGCGCTG
GTGGCCGCTC CCCTCGGCTT CCGTACTGTC ATCGTCATTC CCGAGACCCA GTCCCAGGAA
AAGAAGGACA TGCTGAAGCT CGCCGGCGCC ATCCTGGTGG AGGTGCCGGC CGTGGCCTAT
GCCAATCCGA ATAATTACGT GAAGGTCTCC GGCCGCCTCG CCGAGGCACT CGCCAAGACC
GAGCCCAACG GCGCCATCTG GGCCAACCAG TTCGACAATG TGGCCAACCG GCAGGCCCAT
ATCGAAACCA CCGGGCCCGA GATCTGGGAG CAGACCTGCG GCAAGCTGGA CGGCTTCATC
TGCGCGGTGG GCACCGGCGG CACGCTGGCC GGCATCGCCA TCGCGCTGAA GGCGCGCAAC
CCCAACATCC GCATCGGCCT CGCCGATCCC ATGGGCGCGG CGCTCTATTC CTACTACACC
ACCGGCGAGC TGAAGGCCGA GGGCTCCTCC ATCACCGAGG GCATCGGCCA GGGGCGCATC
ACCGCCAACC TCGTGGACGC GCCCATCGAC ACCGCCTTCC AGATCCCGGA CGAGGAAGCT
TTGCCCGTGG TGTTCGACCT GCTGCAGCAC GAGGGCCTGT GCCTCGGCGG CTCGTCGGGG
GTGAACGTGG CCGGCGCCAT CCGCCTCGCG AAGGAGATGG GGCCGGGCCA CACCATCGTG
ACCATCCTGT GCGACTACGG CACCCGCTAC CAGTCCAAGC TCTTCAACCC CGAGTTCCTG
CGCTCCAAGA ACCTGCCGGT GCCGGAATGG CTGGAGCGCA AGGTCGAGGT GCCGAACGTC
CTGGTCTGA
|
|---|
| Protein sequence | MIRNGLVDSI GNTPLIRLKR ASEETGCEIL GKAEFLNPGQ SVKDRAALGI IKDAVARGAL
KPGGVIVEGT AGNTGIGLAL VAAPLGFRTV IVIPETQSQE KKDMLKLAGA ILVEVPAVAY
ANPNNYVKVS GRLAEALAKT EPNGAIWANQ FDNVANRQAH IETTGPEIWE QTCGKLDGFI
CAVGTGGTLA GIAIALKARN PNIRIGLADP MGAALYSYYT TGELKAEGSS ITEGIGQGRI
TANLVDAPID TAFQIPDEEA LPVVFDLLQH EGLCLGGSSG VNVAGAIRLA KEMGPGHTIV
TILCDYGTRY QSKLFNPEFL RSKNLPVPEW LERKVEVPNV LV
|
|---|
| |