Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4670 |
Symbol | |
ID | 5420685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 5167276 |
End bp | 5169870 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640883934 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_001419547 |
Protein GI | 154248589 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGC CGATCGCTGT ACTTCCTCCG TTCGCCGCCA GCTGGGCTAC GGATGCTGTG GTGTTTCTGG ACGAAACCGG CGTCATCACC TTCGTCAATG CGGCCGCGGA GCACCTGTGG GGCTTGTCTG CCGCCGCCAT GGTCGGCCGC AACGCGCGCG TTGTCTTTCC GGCGGCGCTG CGCTTCGACC CGGCGCTGCG CTGGACCATG GAGGACATGG TCGGCGCCGA CTGGCAGGTG GTGATCACCC GCCCGGACGG CTCCAGCGCC TTCGCCCTCG TCCGCCTGGC GCAGGTGTGG CACGCCGGCA AAGCCGGCTA TGCGGCAGTG GTGCACGCCA TGCCGGACCC CACGGGGGCA GCCAAGCACA TCAGCATCCT CTCGCTCGTC GCCGAGAAAA CCGATCGCGG CGTGGTCGTC ACCGATGCGC GGCACCGGAT CGTCTACACG AACCGCGCCT TCCAGGAGAT GCTCGGCTAC GTCGAGGGCG AGGCCGAAGG GCGCGTGCTG GAGGACCTCT TGGCCACCGG CAAAGGCGCC ACCGACCTTG CCGCCCGCAT CAGCAGCGGC ATCCAGCGCC GGATGCCGTT CCCGGAAGAC GTGCCGCTGC GCGGCGCCTC CGGCAACGAG GTGTGGGTCT CCGCCATCGT CACGCCGGTG CTGAACCAGG TCACCGGCGC GCTCGAGCAC GTGGTCGCCG TGCTGGCGGA CATCACCCAC GCCCGCCTCA TGGAGGACCT GCAGCGGCAG GTGCTGGCGG CGCTGGCGGC CGACGCGCCG GCTCGCGACA TTCTCGAGCT GCTGTGCCGC AAGGTGGAGG AACTGGCCCC CGGTGTCCTC TGCTCGATCA TGGGCGTCAC CGCCGACGAC CGGCTGACGG TGCTGGCCGC CCCCAATCTG CCAGCCGCAT TCTCGGCCGC GGTGGAGGGC CTGGCCATCG GCCCCAAGTG CGGCAGCTGC GGCACCTCGG CGTTTCGCGG CGAGGCGGTG ATGGTGGAGG ACATCACCAC GAGCCCGCTG TGGGAGGATT TCAAGGACCT CGTGCTTCCC CACGGCATCA AGGGCTGCTG GTCCATCCCG GCCAGGCTGC GCGGCGGCAA GGTAGCCGCG ACCTTCGCCT TCTACTTCCC CGGCCCCCCC TTCGCCGCGC CCTGGCTCGA AAGCGTGGTC TCGGCCTGCG CCGACCTGTG CGCGCTGGTC CTCGAGCGCT CGGAAGCGCG CGACCGCATC GCCACCCTTG CCAGCATCGA CGCGCTGACG GGCCTGCCCA ATCGCCGCCG GCTGATCGAA TCCCTGGGCG ACCTCATCGC CGAGGCGGCC GAGCGCGACG AACCCCTCGC GGTGATGATG CTCGACGTCG ACCACTTCAA GGACGTGAAC GAGACCCTCG GCCATTCCAC CGGCGACGAG CTTCTGGTGG AGATGGCACG GCGCCTCCAG GCGCAGTTGC GCACCGGGGA CACGGTGGGC CGCACCGGCG GCGACGAGTT CGTGGTGGTG GTGCACGACT GCGCCGCGGA GGAGGCCGCC CGCATCGCCC GCCGCCTCAT CGACTACCTG AGCGCCCCCA TCCCGGCGCA GAAGCTGCAC CTCACCATGT CGGCGTCGGT GGGCATCGCC CTTTATCCCC AGCACGGCAC TAGCGCCGAG ACCTTGCTGC GGCACGCCGA CACCGCCATG TACGAGGCCA AAAGCAAGGC CAGGGGCCGG TTCCAGTTCT TCACCGAGGA TCTGAACAAG AGGGTGGAGG ATCGCCTGGT GCTGTCCGTC GCCCTGCGCG AGGCGGTGCA GAATCAGGCA CTGCGCCTCG TCTACCAGCC CCAGGTCACG CTGGCGAAGG TCACGCTATC GAACGACACG CCATCGAACG GTACGCTTGC GGGCGGCGCG CTGCACGGCG TGGAGGCGCT CGCCCGCTGG TCGGATCCGG TCCACGGCGA GGTTCCGGCG CCCCGCTTCA TCGCGCTGGC GGAGGAATAC GGCTTCATCG AGAGCATCGA CCAGTGGGCG GTGGAGGAGG CCTGCCGGCA GATCGCGGTC TGGCGCGCGG AAGGGGTGGC GGTGCCGCAC GTCTCGGTGA ACCTCTCCCC CCTGAGCTTC CGCAGCGGCG AGATCGTGGG GATCATCGCC GATGCGCTGG AGCGGCATCG CCTGGCCCCG AGCGACCTTC GGGTCGAGAT CACCGAGCGG GTGACCATGG ACCAGAACCC GCATTCGTTC GCCACGGCGC GCGCCATCGA CGCGCTGGGC GTGCGCATCG CCATGGACGA TTTCGGCACC GGCTATTCCA GCCTCAGCGC CCTGTCGCGC CTGCCCATCG CCGAGCTGAA GATCGACCGC TCCTTCATGC TGAGCATCGA GCAAGACAAG AATGCCCTCG CCCTGGCCAC GGCGGTGATC CTCATCGGCC AGAGCCTCGG CATGGCGGTG GTGGCGGAAG GCGTGGAGAC GGCGGCGCAG GCCGACCTGC TGCGCACCCT CGGCTGCCAT GCCGTCCAGG GCTATTTGTT CGCCCGGCCG CTGGAGGCGG ACGCCGTCGC CGGCTGGCTT GCCGCCAACG CGCCCTCGCA CACCCCGGAA CGCGCGGAAC CCTGA
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Protein sequence | MGKPIAVLPP FAASWATDAV VFLDETGVIT FVNAAAEHLW GLSAAAMVGR NARVVFPAAL RFDPALRWTM EDMVGADWQV VITRPDGSSA FALVRLAQVW HAGKAGYAAV VHAMPDPTGA AKHISILSLV AEKTDRGVVV TDARHRIVYT NRAFQEMLGY VEGEAEGRVL EDLLATGKGA TDLAARISSG IQRRMPFPED VPLRGASGNE VWVSAIVTPV LNQVTGALEH VVAVLADITH ARLMEDLQRQ VLAALAADAP ARDILELLCR KVEELAPGVL CSIMGVTADD RLTVLAAPNL PAAFSAAVEG LAIGPKCGSC GTSAFRGEAV MVEDITTSPL WEDFKDLVLP HGIKGCWSIP ARLRGGKVAA TFAFYFPGPP FAAPWLESVV SACADLCALV LERSEARDRI ATLASIDALT GLPNRRRLIE SLGDLIAEAA ERDEPLAVMM LDVDHFKDVN ETLGHSTGDE LLVEMARRLQ AQLRTGDTVG RTGGDEFVVV VHDCAAEEAA RIARRLIDYL SAPIPAQKLH LTMSASVGIA LYPQHGTSAE TLLRHADTAM YEAKSKARGR FQFFTEDLNK RVEDRLVLSV ALREAVQNQA LRLVYQPQVT LAKVTLSNDT PSNGTLAGGA LHGVEALARW SDPVHGEVPA PRFIALAEEY GFIESIDQWA VEEACRQIAV WRAEGVAVPH VSVNLSPLSF RSGEIVGIIA DALERHRLAP SDLRVEITER VTMDQNPHSF ATARAIDALG VRIAMDDFGT GYSSLSALSR LPIAELKIDR SFMLSIEQDK NALALATAVI LIGQSLGMAV VAEGVETAAQ ADLLRTLGCH AVQGYLFARP LEADAVAGWL AANAPSHTPE RAEP
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