| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4660 |
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| Symbol | |
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| ID | 5420766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 5150891 |
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| End bp | 5152513 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640883924 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001419537 |
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| Protein GI | 154248579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.845725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.101671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC GCGAATTCGT GAAGTCTGCG TCTGCCACCG CCGTTGCCAC CGGAACCGGT
GTCGCCGCCC CGGCGGTCTT CTCCTCGGCA CAGGCGCAGG CGCGCAACGA GACGCTGCTG
ATCGTCTCCG AGAGCGGCCC CAACAACCTC GACATCCATG GTGTCGGCAC CAACGTGCCG
GGCTATGAGG CGAGCTGGAA CACCTACGAC CGCCTCATCA CCCACGAGAT GACCGAGAAG
GACGGGGTCC GCTACTACGA CCGCGACAAG CTGAAGGGCG AGCTCGCCGA GGACATGAAC
ATCGGCGACA TGTCGGTGAC CTTCAAGCTG AAGAAGAACG CCACCTTCCA GGACGGCACC
CCGGTCACCG CCAAGGACGT GAAGTGGTCG CTGGACCGCG CCGTCTCCGT GGGCGGCTTC
CCCACCTTCC AGATGAAGGC CGGCTCGCTG GAGAAGCCCG AGCAGTTCGT GGTGGTGGAT
GACCACACGG TGCGCGTGGA CTTCATCCGC AAGGACCGCC TCACCATCCC CGATCTCGCC
GTGATCGTGC CCTGCGTCAT CAATTCCGGG CTGGTGCAGA AGAACGCCAC CGAAAAGGAC
CCCTGGGGCC TCGAATACAC CAAGCAGAAC ACCGCCGGCT CCGGCGCCTA TCGCGTCACC
AAGTGGACCC CCGGCACCGA GGTGATCTTC GAGCGCTTCG AGGACTGGAA GGGCGGCCCG
CTGCCCAAGA TCAAGCGCGT GATCTGGCGC ATGGTGCCCT CCGCCGGCAA CCGCCGGGCG
CTGCTGGAGC GCGGCGACGC CGACATCTCC TACGACCTGC CCAACAAGGA TTTCGTGGAG
CTGAAGCAGG CCGGCAAGCT GAACATCACG TCGGTGCCCT ATTCCAACGG TGTCCAGTAC
ATCGGCATGA ACGTGAAGAA CCCGCCCTTC GACAATCTGA AGGTGCGCCA GGCCATCGCT
TACGCCATCC CCTACCAGAA GATCATGGAC GCCGCCCTGT TCGGCCTCGC CAAGCCCATG
TTCGGCGCCC CGGCGGATGC GCAGACCCAG GTCAAGTGGC CGCAGCCCAC CAAGTTCGTC
ACCGACCTCG CCAAGGCCAA GCAATTGCTG GCGGAGGCGG GCTATCCCGA CGGGCTGGAG
ACGACGCTGT CCTTCGACCT CGGCTTTGCC GGCGTGAACG AGCCGCTGTG CGTGCTGCTG
CAGGAAAACC TGGCGCAGAT CGGCATCAAG ACCACCATCA ACAAGATCCC CGGCGCCAAC
TGGCGCACCG AGCTGACGAA GAAGGTGCTG CCGCTGTTCA CCAACGTGTT CTCGGGTTGG
CTGGACTATC CCGAATACTT CTTCTTCTGG TGCTACCACG GCAACAATTC GATCTTCAAC
ACCATGAGCT ACCAGTCGGC GGCCATGGAT GCCTTCATCG ACGGCGCCCG TGCCGCCGCC
GCCAACGGCG ACAAGGCGGC CTATGATGCG GACGTGAAGG GCATGGTGGA CCTCGCCTTC
GCCGACGTGC CGCGTATCCC GCTCTACCAG CCCTATGTGA ACGTGGCGAT GCAGAAGAAC
ATCACCGGCT ACGAATACTG GTTCCACCGC CGTCTCGACT ATCGCGCTTT CCAGAAGGGG
TGA
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| Protein sequence | MNRREFVKSA SATAVATGTG VAAPAVFSSA QAQARNETLL IVSESGPNNL DIHGVGTNVP
GYEASWNTYD RLITHEMTEK DGVRYYDRDK LKGELAEDMN IGDMSVTFKL KKNATFQDGT
PVTAKDVKWS LDRAVSVGGF PTFQMKAGSL EKPEQFVVVD DHTVRVDFIR KDRLTIPDLA
VIVPCVINSG LVQKNATEKD PWGLEYTKQN TAGSGAYRVT KWTPGTEVIF ERFEDWKGGP
LPKIKRVIWR MVPSAGNRRA LLERGDADIS YDLPNKDFVE LKQAGKLNIT SVPYSNGVQY
IGMNVKNPPF DNLKVRQAIA YAIPYQKIMD AALFGLAKPM FGAPADAQTQ VKWPQPTKFV
TDLAKAKQLL AEAGYPDGLE TTLSFDLGFA GVNEPLCVLL QENLAQIGIK TTINKIPGAN
WRTELTKKVL PLFTNVFSGW LDYPEYFFFW CYHGNNSIFN TMSYQSAAMD AFIDGARAAA
ANGDKAAYDA DVKGMVDLAF ADVPRIPLYQ PYVNVAMQKN ITGYEYWFHR RLDYRAFQKG
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