Gene Xaut_4658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4658 
Symbol 
ID5420764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp5148712 
End bp5149596 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID640883922 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001419535 
Protein GI154248577 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.249945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.298261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG CCACGGCCGA CACCCCCGCC CCCCGCGGCC TTGCCGCGAC CCTTGCCCAC 
GCGCGCTACG TCATCTCCGA CAACCCGGTC ACCGGCATCG CCTTCGGCAT GTTCCTGGTG
CTGGTGGTGT GCGCGCTGCT GGGGCCGTTC ATCGTGCCCT ACGATCCGCT CGCCAGCGAC
ACGGCGGCCG CGCTCCAGGC GCCGTCTGCC GCCCACTGGT TCGGCACCGA CAATCTGGGG
CGGGACATCT TCTCCCGCGT CATCGTCGCG ACCCGGCTCG ACATGGCCAT CGCGGTGTTC
TCGGTGGCGC TGGTGTTCGC GGCGGGCGGC ATCGCCGGCA TCGCCTCGGG CTTCTTCGGC
GGCTGGACCG ACCGCATCAT CGGCCGCATC TCCGATACCA TCATGGCCTT CCCGCTGTTC
GTGCTGGCCA TGGGCATCGT GGCGGCGCTG GGCAACACGG TGACCAACAT CGTCATCGCC
ACCGCCATCA TCAACTTCCC GCTCTATGTG CGCGTGGCCC GCTCGGAAGC GGCCATCCGC
CGGCAGGCGG GGTTCGTACA GGCGGCGCGC CTCACCGGCA ATTCGGAATG GCGCATCCTG
CTCACGACCA TCCTGCCCAA CATCATGCCC ATCATGATGG TGCAGATGTC GCTCACCATG
GGCTACGCCA TCCTCAATGC GGCGGGCCTC AGCTTCATCG GCCTCGGCGT GCGCCCGCCC
ACCCCGGAAT GGGGGATCAT GGTGGCGGAA GGCGCGGCCT ACATCGTCTC CGGCGAATGG
TGGATCGCCC TGTTCCCCGG CCTCGCGCTC ATGTTCGCGG TGTTCTGCTT CAACCTGCTG
GGTGACGGTC TGCGCGACAT CGTCGACCCC CAGCGCCGCA CCTGA
 
Protein sequence
MTLATADTPA PRGLAATLAH ARYVISDNPV TGIAFGMFLV LVVCALLGPF IVPYDPLASD 
TAAALQAPSA AHWFGTDNLG RDIFSRVIVA TRLDMAIAVF SVALVFAAGG IAGIASGFFG
GWTDRIIGRI SDTIMAFPLF VLAMGIVAAL GNTVTNIVIA TAIINFPLYV RVARSEAAIR
RQAGFVQAAR LTGNSEWRIL LTTILPNIMP IMMVQMSLTM GYAILNAAGL SFIGLGVRPP
TPEWGIMVAE GAAYIVSGEW WIALFPGLAL MFAVFCFNLL GDGLRDIVDP QRRT