| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4653 |
|---|
| Symbol | |
|---|
| ID | 5421224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5142874 |
|---|
| End bp | 5143827 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640883917 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001419530 |
|---|
| Protein GI | 154248572 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.519057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAG CTAGCGAATG TTTTTCATCT CACGTATCAT TCTGCGTGAT GAATGCTCCG
GAACCGCACC CCATGACGGT GATGCTCGAC CCCGACCAGC TGCGCACATT CGTGGCCATT
GCCGAGACCG GCAGCTTCAC CCGTGCGGCG GAGGTGGTGC ACAAGACGCA GTCCGCCGTC
TCCATGCAGA TGAAGCGCCT GGAGGAGCGC GTGGGCCGCC CGGTGTTCAT GCGCGACGGC
CGCGCCTCGC GCCTGACCGA GGACGGCGAG CGCCTGCTCG ATTATGCCCG GCGCATCGTC
AAGCTGAACG TGGAAGCGGT GCTCAGCTTC GCCGATGCCG CCCTGTCGGG GCGGGTCTGC
CTGGGGGTGC CGGACGATTA CGCCGACCGC TACCTGCCGG ACATCATGGC CCGCTTCTCG
CGGACCCATC CCTCGGTGGA GCTGACCGTG CTGTGCGAGC CGTCGAGCGA ACTGGTGCAG
CACATCGCCG GCGGCACCAT CGACCTCGCC ATCATCACCG CGACCGAGAT CACCGCCCGG
AACGCCCACG TCATCCGCCG CGAGCGGCTT TTGTGGGTGT CCTCGGCGCG GCACAGCGTG
CATCTGGAGA CGCCGGTGCC GCTGGCGCTG GGCCGAACCA CCTGCCAGTG GCGCGATATC
GCCGTCTCCC GGCTGGTCGG GGCGGGGCGC AGCCACCGCA TCCTCTACAC CAGCCCCAAC
AGCGGCGCGG TGGCGGCGGC GGTGCTGGCT GGTCTCGCGG TCTCGGTGCT GCCGGAATCG
GCGCTGCGCA CCGGCATGCG CGTGCTCGGC AGCGCCGACG GCTATCCGCC CCTACCCCCG
TGCGACATCG GCCTGCTGCG CAATCGCCAC GAGCCGTCGC TGCTGGCGGA CGCGCTGGCC
CAGCACATCG TGCAGGGCCT CGACAACCTC ACGGATGCTG AAGCGGCGCA GTGA
|
|---|
| Protein sequence | MNQASECFSS HVSFCVMNAP EPHPMTVMLD PDQLRTFVAI AETGSFTRAA EVVHKTQSAV
SMQMKRLEER VGRPVFMRDG RASRLTEDGE RLLDYARRIV KLNVEAVLSF ADAALSGRVC
LGVPDDYADR YLPDIMARFS RTHPSVELTV LCEPSSELVQ HIAGGTIDLA IITATEITAR
NAHVIRRERL LWVSSARHSV HLETPVPLAL GRTTCQWRDI AVSRLVGAGR SHRILYTSPN
SGAVAAAVLA GLAVSVLPES ALRTGMRVLG SADGYPPLPP CDIGLLRNRH EPSLLADALA
QHIVQGLDNL TDAEAAQ
|
|---|
| |