| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4630 |
|---|
| Symbol | |
|---|
| ID | 5424062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 5117641 |
|---|
| End bp | 5118849 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640883894 |
|---|
| Product | NADH dehydrogenase I, D subunit |
|---|
| Protein accession | YP_001419507 |
|---|
| Protein GI | 154248549 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.193494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGACA TCGCCGACGA GATGAAGCCG GCCGACAAGG TCCGTAACTT CCAGATCAAT
TTCGGCCCGC AGCACCCTGC TGCGCATGGC GTGCTGCGCC TCGTGCTGGA ACTGGACGGC
GAGGTGGTCG AGCGGGTGGA CCCGCATATC GGCCTCCTGC ACCGCGGCAC CGAGAAGCTG
ATCGAGGCCA AGACCTATCT GCAGGCTGTG CCCTATTTCG ACCGGCTCGA CTATTGCGCG
CCCATGAACC AGGAGCACGC CTTCTGCCTC GCGGCGGAAA AGCTCCTGGG CATCGAGGTG
CCCAAGCGCG GCCAGCTCAT CCGCGTGCTG TATTCCGAGA TCGGGCGCCT GCTCTCCCAC
CTCCTCAACG TCACCACGTT CGCCATGGAC GTGGGCGCGC TGACCCCGCC GCTGTGGGGC
TTCGAGGAGC GTGAGAAGCT CATGATCTTC TATGAGCGCG CCTCGGGCAG CCGCATGCAC
GCGGCCTATT TCCGTCCCGG CGGCGTGCAC CAGGACCTGC CGCGCGCGCT GGTGGAGGAT
ATTGGCGCCT TCTGCGACCC GTTCCTGAAG CTGCTGGACG ATCTCGACGG CCTCGTCACC
GAGAACCGCA TCTTCAAGCA GCGCACCGTG GACATCGGCG TGGTGTCGCT GGAGGACGCG
CTGGCCTGGG GCTTCTCGGG CGTGATGGTG CGCGGCTCCG GCGCGGCCTG GGACCTGCGC
CGCGCCCAGC CCTATGAGTG CTATTCCGAG CTGGACTTCG ACATCCCCAT CGGCAAGCAC
GGCGACTGCT ACGACCGCTA CGTGGTGCGC ATGGAAGAGA TGCGCCAGTC CACCAAGATC
ATGAAGCAGT GCGTGGAACG CCTGCTGAAG GAGGCCGGCC CGGTCTCCAC CACGGACAAC
AAGATCGTGC CGCCCAAGCG GGGCGAGATG AAGCGCTCCA TGGAAGCGCT CATCCACCAC
TTCAAGCTCT ACACCGAGGG CTTCCACGTC CCGGCCGGCG ACGTGTACGC CGCGGTTGAG
GCGCCCAAAG GCGAATTCGG CGTCTATCTG GTCTCGGACG GCACCAACAA GCCTTACCGC
TGCAAGATCC GCGCTCCGGG CTTCGCCCAC CTTCAGGCGA TGGATTTCCT GTGTCGTGGT
CACATGCTCG CCGACGTGTC GGCGGTGCTG GGCTCGCTCG ACATCGTGTT CGGGGAGGTG
GACCGCTGA
|
|---|
| Protein sequence | MVDIADEMKP ADKVRNFQIN FGPQHPAAHG VLRLVLELDG EVVERVDPHI GLLHRGTEKL
IEAKTYLQAV PYFDRLDYCA PMNQEHAFCL AAEKLLGIEV PKRGQLIRVL YSEIGRLLSH
LLNVTTFAMD VGALTPPLWG FEEREKLMIF YERASGSRMH AAYFRPGGVH QDLPRALVED
IGAFCDPFLK LLDDLDGLVT ENRIFKQRTV DIGVVSLEDA LAWGFSGVMV RGSGAAWDLR
RAQPYECYSE LDFDIPIGKH GDCYDRYVVR MEEMRQSTKI MKQCVERLLK EAGPVSTTDN
KIVPPKRGEM KRSMEALIHH FKLYTEGFHV PAGDVYAAVE APKGEFGVYL VSDGTNKPYR
CKIRAPGFAH LQAMDFLCRG HMLADVSAVL GSLDIVFGEV DR
|
|---|
| |