| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4586 |
|---|
| Symbol | |
|---|
| ID | 5424004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5068905 |
|---|
| End bp | 5070803 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640883851 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001419464 |
|---|
| Protein GI | 154248506 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.409172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.67715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGTC GCGACACGCT TGCCGAGCCT ATGGCCGGCA CGGCTGCGCT TGGACAATCC
GGACCGACTG GCACCGGAAC CCCGCGGCAA ACCCGAAATG CCCAAGGGAG CGCCTTCTCC
AGCGATCCCG GAACGTTCGC TCGCGATTTC TTGTCCTATG GCAGGGACGT GGCCGAGCGC
TGGATCCTGT TCTGGGACAC GCTGCGCCAG CGGGCCGACA ACATGCTGGC GCACGAGCGC
GCCGGTAAGC CGGCTCTGCT CGACTTCGAC TATGAGGTCC TGCTCGATGC CCGCCGGCTC
GAGCGTCCGG CAAACTATGC CCTCCTGCGC GTGACCCGCG TGGGGGACGA GTGCCTGGAA
GATTGTCTGG ACGCGGCCAA GCCGCCCGTG GTGATCCTCG ACCCGCGCGC CGGCCACGGC
CCCGGCATCG GTGGCTTCAA GCAGGACTCC GAGGTCGGCA TCGCCCTGCA CCAGGGGCAC
CCCGTCTATT TCGTCACCTT CTATCCAGAG CCCGCCGCGG GGCAGACGCT CGCCGACGTG
CTTCACGTGC TGCGGCGGTT CGTCGAGGAG GTGTCATGGC GACATTCCGG CGCCGCGCCG
GTGCTCTATG GAAACTGCCA GGCCGGCTGG GCGGTGACGC TGCTCGCCGC GGACTGCGCG
GGGCTGGCCG GACCGGCCGT GCTGAACGGG ACCCCTCTGT CCTACTGGGC GGGCGAGACC
GGCATCAATC CCATGCGCAT CGCGGCCGGC TTCGAGGGCG GGGCGTGGCT GACACACCTC
CTCGCCGACC TCGGTGACGG ACGTTTCGAC GGCGCCTTCC TGGTGCAGAA CTTCGAGGGA
CTGAAGCCCG AGGCCGTGTG GGATAAGTAT GCGAACCTTT ACACCCACTT GGACACTGAG
CGGGAGCGGT TCCTCGCCTT CGAGCGCTGG TGGGGCGGCT ATTACTTCCT GAGCCGGGAG
GAGATCCTCG CCATCGTGGA GAATTTCTTC GTCGGTAACA GGCTGGAGCA GGGCCGCGTC
CAGATCTGCG AAGGGTGCCA TGCGGACCTC AGGCGCATCC GAAATCCGCT CGTGATCTTC
GCCTCCTATG GCGACAACAT CACGCCGCCC CATCAGGCGC TCGGCTGGAT ACCCGCCGTA
TACAAGGATA CGGACGACCT GAAGGCGGCG GGCCAGCGCA TCGTCTATCT CATCAACCGC
CATGTGGGTC ACCTCGGCAT CTTCGTTTCC GCAAAGGTTG CGCGGCTGGA GCATCGGGCC
ATCCTCGAAA GCCTGCCGCG GATCGAGACG CTCCCGCCCG GCCTCTACGA GATGAAGATC
GACAATCCGT CCGGCGATCC CGATTGCCGT GAGGGAGCCT ATCAGGTCCG CTTCGAGGCG
CGCGAGGTGT CGGACATCCG CTTCGCCCGG CAGGACCCTG CCTTCGAGCG CGTGCGCGAC
CTGTCGGAGC GCAACGAAGC CTTCTACCGC ACGTTCGTCA GCCCCTGGGT ACGGGCGCTG
ACGACGCCCT GGTCGGCGGC GATGCTTGAG ACGCTGCACC CCATGCGCAC CAGCCGCTAC
CTGTTGTCGG AAGGCTTTAT GCCCTGGATG CGCGGTGTCC GATGGCTCGC GGAGCAGGTC
GCCGCCGACC GGCATCCGGC CGCAGCGGAC AACCCCTTCA AGGTCGAGGA GGAGCACGTC
GTCTCGCGCG TCGCCGAGGG GATCGAGCAG GGCCGGCGCC TGCGGGACGC CCTGTGGGAG
CGCCTCTTCG ACAGCCTCTA TGGCGGCGCA GGCAATGCCC GCCCCGTCGT GCCGGAACAC
CGGGGCACGA TCGATGAAGC ACCGCCGCTA GACACACGGA CCGGTTTGGA TTTCCAGGCG
GCCGGCATCA GCCGCGCCGC CACAATAGGA GGGAGCTGA
|
|---|
| Protein sequence | MYGRDTLAEP MAGTAALGQS GPTGTGTPRQ TRNAQGSAFS SDPGTFARDF LSYGRDVAER
WILFWDTLRQ RADNMLAHER AGKPALLDFD YEVLLDARRL ERPANYALLR VTRVGDECLE
DCLDAAKPPV VILDPRAGHG PGIGGFKQDS EVGIALHQGH PVYFVTFYPE PAAGQTLADV
LHVLRRFVEE VSWRHSGAAP VLYGNCQAGW AVTLLAADCA GLAGPAVLNG TPLSYWAGET
GINPMRIAAG FEGGAWLTHL LADLGDGRFD GAFLVQNFEG LKPEAVWDKY ANLYTHLDTE
RERFLAFERW WGGYYFLSRE EILAIVENFF VGNRLEQGRV QICEGCHADL RRIRNPLVIF
ASYGDNITPP HQALGWIPAV YKDTDDLKAA GQRIVYLINR HVGHLGIFVS AKVARLEHRA
ILESLPRIET LPPGLYEMKI DNPSGDPDCR EGAYQVRFEA REVSDIRFAR QDPAFERVRD
LSERNEAFYR TFVSPWVRAL TTPWSAAMLE TLHPMRTSRY LLSEGFMPWM RGVRWLAEQV
AADRHPAAAD NPFKVEEEHV VSRVAEGIEQ GRRLRDALWE RLFDSLYGGA GNARPVVPEH
RGTIDEAPPL DTRTGLDFQA AGISRAATIG GS
|
|---|
| |