| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4565 |
|---|
| Symbol | |
|---|
| ID | 5421435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5045546 |
|---|
| End bp | 5046691 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640883829 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_001419443 |
|---|
| Protein GI | 154248485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.190968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAG CGACTCGTCC GCCGGAGTCC TTCCAGCAGA CTGCGCGCTG GCCCGACCGC
CGCATCCTCG ACCTGTTCGG CATCGCGCAC CCGATCCTGC TGGGACCCAT GGCGGGCGCG
GGCACACCGA AGCTTGCCAT CGCGGTGGGT GAGGGGGGCG GCCTCGCTTC CCTGCCCGGT
GCCATGTACC AGCCGAATGA ACTGCGCGCG GCCATCGAAG AGGTGCGCGC CGGGCTTCCC
GGCCGGCCGC TCAACGTCAA TTTCTTCTGC CACACTCCGC CCACGCCCGA TCCGGTGCGC
ATGATGGGCT GGCGGACGCG GCTCGCGCCT TATTATGTGG AGCACGGCCT CGACCCGCAG
GCGACGCCGC CGGCCGGCGG GCGCGCGCCG TTCGACGCCA CCTTGTGCGC CTTGGTGGAG
GAGACGCGGC CGGAGGTGGT GAGCTTCCAT TTCGGCCTGC CCGATCCGGC GCTGCTGGCG
CGGGTGAAGG CGACGGGGGC CAAGGTGATC TCGTCAGCCT CCACCGTGGC CGAAGCCAGA
TGGCTGGAAG CGCGCGGCTG CGACGCCATC ATCGCCATGG GGCTGGAAGC GGGCGGCCAT
CGCGCCACCT TCCTCGGTAA CGATGTGGCG GGCGACATGG CCGGCGACAT GAGCCGGCAG
GTGGGCACCT TCGCCCTGGT GCCGCAGGTG GCGGATGCGG TGGGCGTGCC GGTGATCGCC
GCCGGCGGCA TCGCCGACGC GCGGGGCATC GTCGCGGCGC TGGCGTTGGG CGCTTCCGCG
GTGCAGGTGG GCACCGCCTT CCTGCTGTGC CCGGAAGCGA GGATCCCGGC CGTGCATCGC
GCCGCGCTGG AGGCGGCGGG GGACGACAGC ACCGCCCTCA CCAACCTGTT CACCGGCCGC
CCGGCGCGCG GCATCATGAA CCGGGTGATG CGGGAGGTGG GCCCCCTCTC CGCCGACGCT
CCCGCCTTCC CGCTGGCCGG CGGCGCCCTC GCCCCGCTGC GGGCGGCGGC CGAAGCCGAG
GGCCGGGATG ACTTCACCAA CCTGTGGGCC GGGCAGGCCG CGCGCCTCGC CCCCCGCCTG
CCCGCCGCCG ACCTGACCCG CAAGCTCGCC ATCGACGCCC TCGCCCAGCT AAATCCCTCG
GCCTGA
|
|---|
| Protein sequence | MTQATRPPES FQQTARWPDR RILDLFGIAH PILLGPMAGA GTPKLAIAVG EGGGLASLPG
AMYQPNELRA AIEEVRAGLP GRPLNVNFFC HTPPTPDPVR MMGWRTRLAP YYVEHGLDPQ
ATPPAGGRAP FDATLCALVE ETRPEVVSFH FGLPDPALLA RVKATGAKVI SSASTVAEAR
WLEARGCDAI IAMGLEAGGH RATFLGNDVA GDMAGDMSRQ VGTFALVPQV ADAVGVPVIA
AGGIADARGI VAALALGASA VQVGTAFLLC PEARIPAVHR AALEAAGDDS TALTNLFTGR
PARGIMNRVM REVGPLSADA PAFPLAGGAL APLRAAAEAE GRDDFTNLWA GQAARLAPRL
PAADLTRKLA IDALAQLNPS A
|
|---|
| |