Gene Xaut_4440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4440 
Symbol 
ID5424425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4926224 
End bp4927873 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content65% 
IMG OID640883704 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001419318 
Protein GI154248360 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00251188 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCCATC GCACCGATGG CGGGGCCGTG GCCTACGCGC CCGTGCCCGA GCTTCTCGAC 
ACCAGCGTCG CCGAATTCGG CGACCGCACC GCGCTCAGCT TCTTCGGCCG CAAATGGACC
TATGCCCAGC TCGGCAAGCT GGTGGATCAG GTGGCGGCCG GGCTTCAGGC ACAGGGCGTG
CGCAAGGGCG TCAAGGTGGG CCTGTGCCTG CCCAACACGC CGTATTCGGT CATCTTCTTC
TTCGCCATCA TGAAGGCCGG CGGCACGGTG GTGAATTTCA GCCCGCTCTA TGTGGAGCGT
GAGCTGAGGC ACCAGATCCG GGATTCCGGC ACCATGATCA TGGTGGTGCC CGACCTGAAG
CTGATCCATT CGCGGGTCGC GGCGGTGGCG CAGGAAGCGG GCCTGAAGAC CATCGTCGTG
TGCCCCATGT CCGGAATCCT GCCATTTCCC AAGGGGTTGC TCTTCAACCT GTTCAAGCGC
AAGGAGAAGG CCGAGTTCAG CCTCGGCGAC GGCCTGCACC TGGCCTATGG CGCGCTGCTG
CGTCACGGCG ACCGGCCGCA GCCGGTGGAG GTGGATGTGG AGAACGACGT GGCGGTGCTG
CAATATACCG GCGGCACCAC CGGCGTTCCC AAGGGTGCCA TGCTCACCCA TGCCAATATC
TCCGCCAATG CGGAGCAGGT GATCACCCAT GCCGATTGCC GGCGCATCGG GGTGAAGCGG
GTGCTGGGCG TGCTGCCCCT GTTCCACGTC TTCGCCATGC AGACGGTGAT GCTGATTCCC
ATCTGCCTCG GCGCCGAGAT CATCCTGGTG CCGCGCTTCC AGCTTTCCGA CCTGCTCGAC
CGCATCGAGC GGGAGAAGCC CACCATGTTC CCCGGCGTGC CCACCATCTA TGCCGCCATC
AACGGCGTGG CCGACATCGA CAAGCGCGAC CTGAAATCCC TCACCCTGTG CATTTCCGGC
GGCGCGCCGC TCCCGGCGGA GGTGCGCGAA CGCTTCGAGG ACCTCACCGG CTGCAAGCTG
GTGGAGGGCT ACGGCCTCAG CGAGACCTCG CCGGTGGTGA CCGCCAACCA GCCCCTCGGC
CGGGTGAAGG ACGGTTCGGT GGGCACGGCG CTGCCGCAGA CTGTGATCGA GATTCGCGAT
CTTGAGGATG TGCGGCGCAT CGTCCCCCAG GGCCAGAAAG GGGAGGTCTG CGTGCGCGGT
CCGCAGGTGA TGAAGGGCTA TTATAATCGC CCGGACGACA CCGCCTCCGC CTTCATTGAC
GGCGCGTTGC GCACCGGCGA CGTGGGCTAT CTGGACGAGG ACGGCTACCT CTTCCTCGTG
GATCGCATCA AGGATGTGAT CCTATGCGGC GGCTACAATG TCTATCCACG GGTCATCGAG
GAGGCGCTTT ATCTCCATCC GGCGGTGGCG GAGGCGGTCG CCATCGGGGT GCCCGACCCC
TACCGTGGCC AGGCGCCCAA GGCTTTCGTG ACCCTGCGCG CCGATTCTGA AGCGACCCCC
GGAGAGCTGA TGGACTTCCT CACGGCCCAG ATCTCTAAGA TCGAGATGCC GAAGGCGGTG
GAGATTCGCG ACAGCCTGCC CAAGAGCGTG GTGGGTAAGC TCTCCAAAAA GGAGCTGGTG
GAGGAGGAGC GCCAGCGCGA GCAGGGGTAG
 
Protein sequence
MLHRTDGGAV AYAPVPELLD TSVAEFGDRT ALSFFGRKWT YAQLGKLVDQ VAAGLQAQGV 
RKGVKVGLCL PNTPYSVIFF FAIMKAGGTV VNFSPLYVER ELRHQIRDSG TMIMVVPDLK
LIHSRVAAVA QEAGLKTIVV CPMSGILPFP KGLLFNLFKR KEKAEFSLGD GLHLAYGALL
RHGDRPQPVE VDVENDVAVL QYTGGTTGVP KGAMLTHANI SANAEQVITH ADCRRIGVKR
VLGVLPLFHV FAMQTVMLIP ICLGAEIILV PRFQLSDLLD RIEREKPTMF PGVPTIYAAI
NGVADIDKRD LKSLTLCISG GAPLPAEVRE RFEDLTGCKL VEGYGLSETS PVVTANQPLG
RVKDGSVGTA LPQTVIEIRD LEDVRRIVPQ GQKGEVCVRG PQVMKGYYNR PDDTASAFID
GALRTGDVGY LDEDGYLFLV DRIKDVILCG GYNVYPRVIE EALYLHPAVA EAVAIGVPDP
YRGQAPKAFV TLRADSEATP GELMDFLTAQ ISKIEMPKAV EIRDSLPKSV VGKLSKKELV
EEERQREQG