Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4439 |
Symbol | rpsB |
ID | 5424424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4925027 |
End bp | 4926031 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640883703 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001419317 |
Protein GI | 154248359 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000842833 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGCTTC CCGATTATTC GATGCGCCAG CTGCTTGAAG CTGGCGTGCA CTTTGGACAT CAGTCCCACC GTTGGAACCC GAAGATGGCG CCGTACATCT TCGGCGTCCG CAACAACATC CACATCATCG ACCTGTCGCA GACCGTGCCC GCGCTGCATC GCGCGCTGCA GGCCGTCTCC GACACGGTGG CCCAGGGCGG CCGCGTGCTG TTCGTCGGCA CCAAGCGTCA GGCCCAGGAG CAGGTGGCTG ACGCCGCTCG CCGCTCCGCC CAGTATTATG TGAACTCCCG CTGGCTCGGC GGCATGCTCA CCAACTGGAA GACCATCTCC AACTCCATCG CCCGGCTGAA GAAGCTGGAG GAGATGCTGT CCGGTCCCGA GCAGGGCTCC GGCTACACCA AGAAGGAGCG CCTGACGCTG TCCCGTGAAA AGGACAAGCT CGACAAGGCT CTCGGCGGCA TCCGCGACAT GGGCGGCCTG CCCGACCTGC TGTTCGTCAT CGACACGAAC AAGGAAGACA TCGCCGTGAA GGAGGCCCAG CGCCTCGGCA TCCCGGTGGC GGCCATCCTC GACACCAATT GCGATCCGGA CGGCATCGCC TTCCCGGTTC CCGGCAATGA CGACGCCGGC CGCGCCATCC AGCTCTACTG CGAGCTGGTC GCCCGCGCCG CCATCGACGG CATCGGCCGC GGCCATTCCG ACCTCGGTAT CGACGTGGGC GCCGAAGAGG CCCCGCTGGT GGAAGACCTG CCGGTGGAAA CCGGCGCCTG GTCGTCCTTC GAGCCCCTGT CGGGTCCGCG CGGCGTTGCC GACGACCTGA AGAAGCTCAC CGGCGTCAGC CCCGAGATCG AGCAGAAGCT CAACGATCTC GGCGTGTTCC ACTTCGGCCA GGTGGCCGGG CTCGATGCGA TCGACGCCCA CCGCATCGGC GAGGAAGTGG GACTGCCCGG CCGCGTGGAC GGCTGGGTGG CCCAGGCCAA GGAGCTGTCT GCCGAGGTCG AGTGA
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Protein sequence | MALPDYSMRQ LLEAGVHFGH QSHRWNPKMA PYIFGVRNNI HIIDLSQTVP ALHRALQAVS DTVAQGGRVL FVGTKRQAQE QVADAARRSA QYYVNSRWLG GMLTNWKTIS NSIARLKKLE EMLSGPEQGS GYTKKERLTL SREKDKLDKA LGGIRDMGGL PDLLFVIDTN KEDIAVKEAQ RLGIPVAAIL DTNCDPDGIA FPVPGNDDAG RAIQLYCELV ARAAIDGIGR GHSDLGIDVG AEEAPLVEDL PVETGAWSSF EPLSGPRGVA DDLKKLTGVS PEIEQKLNDL GVFHFGQVAG LDAIDAHRIG EEVGLPGRVD GWVAQAKELS AEVE
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