| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4430 |
|---|
| Symbol | lpxD |
|---|
| ID | 5425102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4914168 |
|---|
| End bp | 4915265 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640883694 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| Protein accession | YP_001419308 |
|---|
| Protein GI | 154248350 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.64622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0511185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG ACGTCTTCTT CCCGCTTCCG GCGCCCCTCA CCCTTGCGGA GGTGGCGGCC
CTCAGCGGGG CGCGGCTGGC CGTCGCCGAT GAGGCGCAGG CTGCCGAACT GGGTGCTCGC
ACCATCACCG GCGTCGGCAC CCTGGAGACG GCGGGACCGG ACGAACTCGC CTTCTGCGAT
ACGGTCCAGT TCGCCGAGAA GCTCGGCACC GTGCGGGCCG GCGCTGTCAT CACCGCCGAG
CGCTTCGCCG CCAAGGCGCC CCCCGGCCTC GTTGTGCTCA TCGCGCCCCG TCCCGCTGCG
GCCTTTCTCG CCGTCACGCG CTTCCTGTTC CCCGGAGCCC TCAAGCCGCT GTCCATCTTC
GGCCAGGACG GCGTGGCGCC GGGCGCTCAG GTGCATCCCA AGGCGCGGCT CGAGGACGGG
GTGACGGTGG ATCCCGGCGC CGTGATCGGT CCCGGCGCTG AAATCGGCGC GGGCACTATC
GTTTGCGCGG GCGCCATCAT CGGACCGAAT GTCCGCATCG GCCGCAACTG TGCCATCGGG
CCCGGCGCCA GCGTCATCCA TGCGTTTCTC GGCAACGGCG TCATCATCCA TGGCGGCGCG
CGCATCGGCT CGGATGGCTT CGGCTACCAG CCAAGCCCCA GGGGCCATGT GAAGGTGCCA
CAGATCGGCC GGGTGGTGAT CCAGGACGAC GTGGAAATCG GCGCCAATAC CACCATCGAT
CGCGGCGCGT TGACCGATAC GGTCATCGGC GAGGGCACCA AGATCGACAA TCTGGTGCAG
ATCGCCCACA ACGTGGTGAC CGGCCGCCAT TGCATCGTCG TGTCCCAGAC CGGGATTTCC
GGGTCCACCA CGCTGGGGGA TTTCGTGATG CTGGGCGGTC AGGTGGGCGT GGTGGGCCAT
GCCACCATCG GCACGGGCGC GCAGATCGCG GCCTCCAGCA ATGTGAAGGG CGATGTGCCA
CCCGGCGTGC GCTGGGGCGG TTCGCCGGCC AAGCCGGTGC GCGAATGGTT CCGCGAGGTA
ACGACCCTCA AGCGCCTCGC CGCGGCCAGC GCCCGGCGCG GCGGCAATGA CGGGGAAGGG
GAAGGATCGG GGGAATGA
|
|---|
| Protein sequence | MSHDVFFPLP APLTLAEVAA LSGARLAVAD EAQAAELGAR TITGVGTLET AGPDELAFCD
TVQFAEKLGT VRAGAVITAE RFAAKAPPGL VVLIAPRPAA AFLAVTRFLF PGALKPLSIF
GQDGVAPGAQ VHPKARLEDG VTVDPGAVIG PGAEIGAGTI VCAGAIIGPN VRIGRNCAIG
PGASVIHAFL GNGVIIHGGA RIGSDGFGYQ PSPRGHVKVP QIGRVVIQDD VEIGANTTID
RGALTDTVIG EGTKIDNLVQ IAHNVVTGRH CIVVSQTGIS GSTTLGDFVM LGGQVGVVGH
ATIGTGAQIA ASSNVKGDVP PGVRWGGSPA KPVREWFREV TTLKRLAAAS ARRGGNDGEG
EGSGE
|
|---|
| |