Gene Xaut_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4417 
Symbol 
ID5423855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4897984 
End bp4899189 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID640883681 
Productdiguanylate cyclase 
Protein accessionYP_001419295 
Protein GI154248337 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGGAC GACGCCGCAT GCACGCCGCC GCGTTTACAC TGTTCATGAA CGTTGCCGTC 
GCGGGGCTCT TTGCGGCGAG CTACGCGACA ATCGCCTTAA TGCATCCGGC GCAGCGGGCA
CCGATCTGGT TCGCGGTCTG CTATGGGCTG GGCATGGTGA CGCCGCTGGC GCAGTTCGGT
CTCGCCTACA CCGCCTGGAC CACCTTTTTC GGCGCCGTCA TCTTTCTCAG CCTCGCCTTC
GCGCTTCTGC TGCTGGTGCC GGCGCTTGCG GTCTTCTACG GCAGCCGCAA GCCATGGCCG
GCGGTGGGGG CAATCGCGGC GCTCACCCTG CTCCTGCCGG TGATCCGCGC GGGCCTGCCC
TACCATCCCC TGACCTACCA GTCGATGTAT CAGGCTCCGT TCACGCTCGC GGTCGCCGCC
TGCGCCTGGG TGGTGCTGCG CGACAGTCCT CGCCACCGCA GCGATTTCGT GCTTGCCGGG
ATGTTGGTGG TATTGGCCGC GCACTTCCCG GTGAAGGCCT ATCTGCTGGT ACAGATGGGC
ACGTCGCGCA CGGCGAAATA TATCGACACC ACCTATGCCC TCGTCTCGCA GGTCAGCTCT
GGCATCCTGT TCCTGGCCAC CGGGCTGATC CTGCTGCTGA AGTCGGTGCA GGCCGTGGTC
CGTGAAAGCC AAATTGCTGC GGAGACCGAC GTGTTGTCCG GCCTGCTGAA CCGGCGCGGC
TTCGACAGCA GGGCCGAGCG CCTCATCGCC CAGGCCAAGG GGCGGCCGGT GGCGCTCCTC
ATCCTCGACC TGGACCACTT CAAGAGTGTC AACGACAGGT TCGGCCACAG CACCGGAGAT
GCCGCCATCC GGGCCTTCGC AGTGCTGCTT TCGCGCACTG TGCCCCCCTC TGCTCTGATT
GCCCGCCTCG GCGGCGAGGA GTTCGCCGTG CTCCTCGATC GCACCGGGCT GGAGGCCGCC
CGGCTCCAGG CGGAGGCGAT CCGACTCGCC ACGTTCCACC ATCAAGAAGT GGGCCTGCCG
AAGCTGACGG TGAGCATCGG CGTCGCGGCC CCTGCCTCGT CCCACCTCCT GCCGGAGGCC
ATGGAGCGGG CGGACGCCGC GCTCTACGAA GCCAAGCGCG CCGGCCGGAA CCGGGTCTGC
TGCGCGGCGG AAAAGACGGC GCCGGCGGTT CCCCTGGCCG TAGTGGCGCA GCGCAACGCG
ACCTGA
 
Protein sequence
MYGRRRMHAA AFTLFMNVAV AGLFAASYAT IALMHPAQRA PIWFAVCYGL GMVTPLAQFG 
LAYTAWTTFF GAVIFLSLAF ALLLLVPALA VFYGSRKPWP AVGAIAALTL LLPVIRAGLP
YHPLTYQSMY QAPFTLAVAA CAWVVLRDSP RHRSDFVLAG MLVVLAAHFP VKAYLLVQMG
TSRTAKYIDT TYALVSQVSS GILFLATGLI LLLKSVQAVV RESQIAAETD VLSGLLNRRG
FDSRAERLIA QAKGRPVALL ILDLDHFKSV NDRFGHSTGD AAIRAFAVLL SRTVPPSALI
ARLGGEEFAV LLDRTGLEAA RLQAEAIRLA TFHHQEVGLP KLTVSIGVAA PASSHLLPEA
MERADAALYE AKRAGRNRVC CAAEKTAPAV PLAVVAQRNA T