Gene Xaut_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4402 
Symbol 
ID5421253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4882309 
End bp4883520 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content72% 
IMG OID640883666 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001419280 
Protein GI154248322 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG TGGCGAATCC CTCATGCGTG GCCATTATCG TCGCCGCCGG ACGCGGCACC 
CGCGCCGGTG GACCGCTGCC GAAGCAATAT CAGGCCATCG GCGGCGAGCC GGTGCTGCGC
CGCACGCTGC GCCTTTTCGC GACCCATCCG CAGATCACGG CCGTGCTCGC CGTCATCCAT
AGCGATGATT CTGTCCGCTT TGCGGACACG GCCCGCGATC TGCCCAAGAT CTTGGCACCG
GCCTTCGGCG GGGCGACCCG CCAGGCGTCT GTCCGCGCGG GGCTGGAAGC CCTTGCCGCC
GCATCGTGCA CCAGCCCGGA CCTGGTGCTG GTGCACGATG CGGCGCGCCC CTACACCTCG
CCGGACCTCA TCGCCCGCGC TGTGGCGGCG GCGCAGGCCG CGGATGCCGC CATTCCCGTG
CTCCCCGTAA CCGACACGGT GAAGCGGGTG GATGCCGCCG GCATCGTGGC CGAGACCTTG
GACCGCGCGG CGCTGCGCAC GGTGCAGACC CCGCAGGCGT TCCGCTTCGA CGCCCTGCGC
GCCGCCCATG CCGCTGCCGC CGCGGCCGGG GTGGAGACGT TGACCGACGA TGCGGCGGTG
ATGGAATGGG CCGGCCAGCC CGTGGCCACC TTCGAAGGCG AGAGCACCAA CGTGAAGCTG
ACCACCCCTG AAGACATGAC CCGCGCCGCC GGCGCCTCCT TCGCAGATCT TGGCGACGTG
CGCACCGGCA CCGGCTTCGA CGTGCACGCC TTCGGCCCCG GCGACCATGT GATGCTCGGC
GGGGTCGCGG TGCCCCACAG CGCCGGCCTC GTCGGCCATT CCGATGCGGA CGTGGGCCTG
CACGCCCTCA CCGACGCGCT GCTCGGTGCG CTGTGCGATG GCGACATCGG AGCCCATTTC
CCGCCCTCCG ACCCGCAGTG GAAGGGCGCG TCCTCCGACC GTTTCCTTGC CCATGCGGTG
GAGAAGGTGA CGGCGCGGGG CGGGCGCATT GCCCATCTCG ACCTCACCCT CATCTGCGAG
GCGCCGAAGG TGGGGCCGCA CCGCGACGCC ATCCGCGCCG CCATTTCGCT TATCACCGGC
GTGCCCCTCG CCCGCGTTTC GGTGAAGGCG ACCACCACCG AGAAGCTGGG CTTCACCGGC
CGGCGGGAGG GCATCGCCGC CATGGCCAGC GCCACCATCC GCCTGCCCTT CGCGGACGAG
GCGGAGGGCT GA
 
Protein sequence
MSEVANPSCV AIIVAAGRGT RAGGPLPKQY QAIGGEPVLR RTLRLFATHP QITAVLAVIH 
SDDSVRFADT ARDLPKILAP AFGGATRQAS VRAGLEALAA ASCTSPDLVL VHDAARPYTS
PDLIARAVAA AQAADAAIPV LPVTDTVKRV DAAGIVAETL DRAALRTVQT PQAFRFDALR
AAHAAAAAAG VETLTDDAAV MEWAGQPVAT FEGESTNVKL TTPEDMTRAA GASFADLGDV
RTGTGFDVHA FGPGDHVMLG GVAVPHSAGL VGHSDADVGL HALTDALLGA LCDGDIGAHF
PPSDPQWKGA SSDRFLAHAV EKVTARGGRI AHLDLTLICE APKVGPHRDA IRAAISLITG
VPLARVSVKA TTTEKLGFTG RREGIAAMAS ATIRLPFADE AEG