| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4399 |
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| Symbol | |
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| ID | 5425191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4878480 |
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| End bp | 4879928 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640883663 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001419277 |
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| Protein GI | 154248319 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.222867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATGC CTACCGGAAG CATCCTGGTC GCCGACGACG ACGCCGCGAT CCGCACCGTG
CTCAACCAGG CGCTGTCGCG CGCCGGCTAC GAGGTGCGGT CCTGCGGCAA CGCCGCCACA
CTCTGGCGCT GGGTGAGCCA GGGCGATGGC GACCTCGTCA TCACCGATGT GGTGATGCCG
GACGAGAACG CCTTCGATCT CCTGCCGCGC ATCAAGAAGG CGCGGCCGGA CCTGCCGGTC
ATCGTCATGA GCGCGCAGAA CACCTTCATG ACCGCCATCC GCGCTTCCGA GCGCGGGGCC
TATGAATATC TGCCCAAGCC GTTCGACCTG AAGGAGCTGA TCTCCATCGT CGGCCGCGCC
CTGGCAGAGC CGAAGAAGGG CGATGGCCAC CACCATTCCC ACGAGGAGCA GGACAATATC
CCGCTGGTGG GCCGCTCGCC CGCCATGCAG GAGATCTATC GCCTCCTCGC CCGGCTGATG
CAGACCGACC TCACCGTGAT GATCGCGGGC GAGAGCGGCA CCGGCAAGGA GCTGGTGGCC
CGTGCGCTCC ATGATTACGG CAAGCGCCGC ACCGGGCCGT TCGTCGCCAT CAACATGGCG
GCGATCCCGC GCGACCTCAT CGAATCGGAG CTGTTCGGCC ACGAGAAGGG CTCGTTCACC
GGCGCCACCA CGCGCAATCC CGGCCGTTTC GAGCAGGCGG AGGGCGGCAC GCTCTTCCTC
GACGAGATCG GCGACATGCC TATGGAGGCG CAGACCCGCC TGCTGCGCGT GCTGCAGCAG
GGCGAATACA CCACCGTCGG CGGGCGTACG CCCATCAAGA CCGACGTGCG CATCATCGCC
GCCACCAACA AGGATTTGCG CACCCTGATC CAGCAGGGCC TGTTCCGCGA GGACCTGTTC
TTCCGCCTGA ACGTGGTGCC TCTGCGCCTG CCGCCGTTGC GCGAGCGCTC GGAAGATGTG
CCGGACCTGG TGCGCCACTT CTTCCTCCAG GCGGAGCGGG AGGGCCTGCC GGCCAAGCAG
ATCGACACCG CCGCCCTCGA CCGGCTGAAG CGCTACCGCT GGCCCGGCAA CGTGCGCGAG
CTGGAGAACC TGGTGCGGCG CCTCGCGGCG CTCTATCCGC AGGAGGTGAT CACCCCCGCC
ATCATCGAGG CGGAGCTGTC AGAGCCCATG CCGAGCGCCC TCTCGGAGGA GGGCCCGGTG
GATGCCACGC TGGCAGCCTC GGTGGAGCGT CACCTCAACA CCTATTTCTC GGGCTTCGGC
GAGGACCTGC CGCCCCCCGG CCTCTATCAC CGCATCCTGA AGGACGTGGA ATACCCACTG
CTTTCGGCGG CGCTGGCGGC TACGCGCGGC AACCAGATCA AGGCCGCGGA GCTTCTGGGC
CTGAACCGCA ACACCCTGCG CAAGAAGATC CGGGATCTCG ATATCCAGGT CATCCGCACG
TCCAGATGA
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| Protein sequence | MSMPTGSILV ADDDAAIRTV LNQALSRAGY EVRSCGNAAT LWRWVSQGDG DLVITDVVMP
DENAFDLLPR IKKARPDLPV IVMSAQNTFM TAIRASERGA YEYLPKPFDL KELISIVGRA
LAEPKKGDGH HHSHEEQDNI PLVGRSPAMQ EIYRLLARLM QTDLTVMIAG ESGTGKELVA
RALHDYGKRR TGPFVAINMA AIPRDLIESE LFGHEKGSFT GATTRNPGRF EQAEGGTLFL
DEIGDMPMEA QTRLLRVLQQ GEYTTVGGRT PIKTDVRIIA ATNKDLRTLI QQGLFREDLF
FRLNVVPLRL PPLRERSEDV PDLVRHFFLQ AEREGLPAKQ IDTAALDRLK RYRWPGNVRE
LENLVRRLAA LYPQEVITPA IIEAELSEPM PSALSEEGPV DATLAASVER HLNTYFSGFG
EDLPPPGLYH RILKDVEYPL LSAALAATRG NQIKAAELLG LNRNTLRKKI RDLDIQVIRT
SR
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